DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_OLICO (Elongation factor Tu OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MARAV (Elongation factor Tu OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+++T T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VL PG+I PHTKF VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +KM V LI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 247 VEIVGIRDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLCVPGSIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKMTVTLIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 398
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_HELAH (Elongation factor Tu OS=Helicobacter acinonychis (strain Sheeba) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 97/157 (61.78%), Postives = 123/157 (78.34%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG++ T+ TVTGVEMF+K LD+ AGDNVG+LLRG +K +++RGMVL KPG+ITPH KF +YVL KEEGGRH+PFF YRPQFY+RTTDVTG ++ E +MVMPGD +K+ VELI +A E G +FAIREGG+TVGAGV+ +IIE Sbjct: 248 VEIVGIRATQKTTVTGVEMFRKELDKGEAGDNVGVLLRGTKKEEVERGMVLCKPGSITPHKKFEGEIYVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSIT-----LPEGVEMVMPGDNVKITVELINSIALELGTKFAIREGGRTVGAGVVSNIIE 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_GEOKA (Elongation factor Tu OS=Geobacillus kaustophilus GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 99/158 (62.66%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 6 VDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL E + TVTGVEMF+K LD+A AGDN+G LLRGV + +++RG VLAKPG+ITPHTKF A VYVL KEEGGRH+PFF+ YRPQFY RTTDVTG ++ E +MVMPGD ++M VELI P+A E+G +F+IREGG+TVGAG + IIE Sbjct: 243 VEIIGLSDEPKTTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVLAKPGSITPHTKFKAQVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGIIT-----LPEGVEMVMPGDNVEMTVELIAPIAIEEGTKFSIREGGRTVGAGSVSEIIE 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_FRASN (Elongation factor Tu OS=Frankia sp. (strain EAN1pec) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 99/159 (62.26%), Postives = 124/159 (77.99%), Query Frame = 3 Query: 3 TVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+K ET TVTGVEMF+K LDE AGDNVGLLLRG+++ D++RG V+ KP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +I+ Sbjct: 244 TVEIVGIKPETTTTTVTGVEMFRKLLDEGQAGDNVGLLLRGIKREDVERGQVIVKPKSITPHTVFEARVYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVLKVIK 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRPTQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBT (Elongation factor Tu OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=tuf1 PE=3 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 98/155 (63.23%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V++VG+K+T TVTGVEMF+K LDE AG+N G+LLRG ++ ++QRG VLAKPGTI PHTKF A VYVL KEEGGRH+PF GYRPQFY RTTDVTG + E +MVMPGD ++M VELI P+A + G+RFAIREGG+TVGAGV+ + Sbjct: 245 VEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGTIKPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAI-----QLKEGVEMVMPGDNVEMSVELIHPIAMDPGLRFAIREGGRTVGAGVVAKV 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACIB3 (Elongation factor Tu OS=Acinetobacter baumannii (strain AB307-0294) GN=tuf PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 98/155 (63.23%), Postives = 120/155 (77.42%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V++VG+K+T TVTGVEMF+K LDE AG+N G+LLRG ++ ++QRG VLAKPGTI PHTKF A VYVL KEEGGRH+PF GYRPQFY RTTDVTG + E +MVMPGD ++M VELI P+A + G+RFAIREGG+TVGAGV+ + Sbjct: 245 VEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGTIKPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAI-----QLKEGVEMVMPGDNVEMSVELIHPIAMDPGLRFAIREGGRTVGAGVVAKV 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHESR (Elongation factor Tu 2 OS=Shewanella sp. (strain MR-7) GN=tuf2 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |