DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHESM (Elongation factor Tu 2 OS=Shewanella sp. (strain MR-4) GN=tuf2 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU2_SHEON (Elongation factor Tu 2 OS=Shewanella oneidensis GN=tuf2 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG++ T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD IKMVV LI P+A ++G+RFAIREGG+TVGAGV+ II Sbjct: 243 VEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_NITEC (Elongation factor Tu 1 OS=Nitrosomonas eutropha (strain C91) GN=tuf1 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.223e-50 Identity = 96/157 (61.15%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL+ T T TGVEMF+K LD+ AGDNVG+LLRG ++ +++RG VLAKPG+I PHTKF A +YVL KEEGGRH+PFFAGYRPQFY RTTDVTG + + +MVMPGD I + V LI P+A +G+RFAIREGG+TVGAGV+ +IE Sbjct: 245 IEIVGLRPTIKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLAKPGSILPHTKFSAEIYVLSKEEGGRHTPFFAGYRPQFYFRTTDVTGSI-----ELPAGVEMVMPGDNISVNVNLIAPIAMSEGLRFAIREGGRTVGAGVVAKVIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 101/157 (64.33%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG + T TGVEMF+KTLD+ AGDNVG+LLRG ++ +++RG V+AKPG+ITPHTKF A VYVLKKEEGGRH+PFF GYRPQFY RTTDVTG ++ E +MVMPGD I V LI PVA E+ +RFAIREGG+TVGAGVI IIE Sbjct: 246 VEIVGFRPTFKTVCTGVEMFRKTLDQGQAGDNVGVLLRGTKRDEVERGQVVAKPGSITPHTKFKAEVYVLKKEEGGRHTPFFPGYRPQFYFRTTDVTGIMT-----LPEGVEMVMPGDNISTEVHLITPVALEKELRFAIREGGRTVGAGVITEIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPA (Elongation factor Tu OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 94/156 (60.26%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+N G+LLRG+++ D++RG VLA PG+ITPHT F + +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD + M V LI P+A ++G+RFAIREGG+TVGAGV+ I+ Sbjct: 243 VEIVGIKDTTKSTCTGVEMFRKLLDEGRAGENCGVLLRGIKREDVERGQVLAAPGSITPHTTFKSEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVAMTVTLICPIAMDEGLRFAIREGGRTVGAGVVAEIV 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SHEHH (Elongation factor Tu OS=Shewanella halifaxensis (strain HAW-EB4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 94/156 (60.26%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 V++VG+K+T T TGVEMF+K LDE AG+N G+LLRG+++ D++RG VLA PG+ITPHT F + +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD + M V LI P+A ++G+RFAIREGG+TVGAGV+ I+ Sbjct: 243 VEIVGIKDTTKSTCTGVEMFRKLLDEGRAGENCGVLLRGIKREDVERGQVLAAPGSITPHTTFKSEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVAMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVAEIV 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_PSEFS (Elongation factor Tu OS=Pseudomonas fluorescens (strain SBW25) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 99/157 (63.06%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T T TGVEMF+K LDE AG+N G+LLRG ++ D++RG VL KPG++ PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD IKMVV LI +A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 246 LEIVGLRDTTVTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFEAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIKMVVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE 397
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_NITWN (Elongation factor Tu OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 95/157 (60.51%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ET+ TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGIRETQKTTVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPAGTEMVMPGDNVAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MACCJ (Elongation factor Tu OS=Macrococcus caseolyticus (strain JCSC5402) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 104/158 (65.82%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 6 VDLVGL-KETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V+++GL +E TVTGVEMF+K LD A AGDN+G LLRGV + D+QRG VLAKPG+ITPHTKF A VYVL KEEGGRH+PFF YRPQFY RTTDVTG V + E ++MVMPGD I+M VELI P+A E G RF+IREGG+TVG+GV+ S+IE Sbjct: 243 VEIIGLTEEPSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREDVQRGQVLAKPGSITPHTKFKAEVYVLSKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----NLPEGTEMVMPGDNIEMNVELISPIAIEDGTRFSIREGGRTVGSGVV-SVIE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_FRASC (Elongation factor Tu OS=Frankia sp. (strain CcI3) GN=tuf PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.597e-50 Identity = 98/159 (61.64%), Postives = 125/159 (78.62%), Query Frame = 3 Query: 3 TVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 TV++VG+K ET + TVTGVEMF+K LDE AGDNVGLLLRG+++ D++RG V+ KP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A E+G+RFAIREGG+TVGAG + +++ Sbjct: 244 TVEIVGIKPETTSTTVTGVEMFRKLLDEGRAGDNVGLLLRGIKREDVERGQVIVKPKSITPHTVFEARVYILNKDEGGRHTPFFKNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMTVELIQPIAMEEGLRFAIREGGRTVGAGQVTKVLK 397 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |