DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_SACD2 (Elongation factor Tu OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 93/156 (59.62%), Postives = 122/156 (78.21%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG+++T T TGVEMF+K LDE AG+NVG+LLRG ++ D++RG VL+KPG++TPHT F + +YVL K+EGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD ++M V LI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 256 LEIVGIRDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLSKPGSVTPHTTFQSEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAC-----ELPEGVEMVMPGDNVQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKII 406
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ROSDO (Elongation factor Tu OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 94/157 (59.87%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+K+T++ T TGVEMF+K LD AGDN+G LLRG+ + ++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFFA YRPQFY RTTDVTG V E ++MVMPGD + VELI P+A EQG+RFAIREGG+TVGAGV+ I E Sbjct: 240 IEIVGIKDTQSTTCTGVEMFRKLLDRGEAGDNIGALLRGIDREAVERGQVLCKPGSVKPHTKFEAEAYILTKDEGGRHTPFFANYRPQFYFRTTDVTGTVQLA-----EGTEMVMPGDNVSFGVELIAPIAMEQGLRFAIREGGRTVGAGVVSKITE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RHOPB (Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisB18) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/157 (60.51%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGL++T+ VTGVEMF+K LD+ AGDN+G LLRG ++ +++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 245 IEIVGLRDTQKTIVTGVEMFRKLLDQGQAGDNIGALLRGTKREEVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_RHOPA (Elongation factor Tu OS=Rhodopseudomonas palustris GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG+++T+ T TGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD I M V LI+P+A E+ +RFAIREGG+TVGAGV+ +IIE Sbjct: 245 IEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVAAIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 93/156 (59.62%), Postives = 119/156 (76.28%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 473 +++VG+ +T+ T TGVEMF+K LD+ AGDNVG+LLRG ++ D+QRG VL KPG+I PHT F +YVL K+EGGRH+PFF YRPQFY RTTDVTG + + E +MVMPGD + + V+LI P+A E+G+RFAIREGGKTVGAGV+ II Sbjct: 245 IEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVLCKPGSIKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGKTVGAGVVAKII 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGE (Elongation factor Tu OS=Mycoplasma genitalium GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 93/157 (59.24%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGLK R VTG+EMF+K LD AMAGDN G+LLRGV++ +++RG VLAKPG+I PH KF A +Y LKKEEGGRH+ F GYRPQFY RTTDVTG ++ E ++MV+PGD + VELI P+ACE+G +F+IREGG+TVGAG + ++E Sbjct: 243 VEIVGLKPIRKAVVTGIEMFKKELDSAMAGDNAGVLLRGVERKEVERGQVLAKPGSIKPHKKFKAEIYALKKEEGGRHTGFLNGYRPQFYFRTTDVTGSIALA-----ENTEMVLPGDNASITVELIAPIACEKGSKFSIREGGRTVGAGTVTEVLE 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DESRM (Elongation factor Tu OS=Desulfotomaculum reducens (strain MI-1) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 103/158 (65.19%), Postives = 121/158 (76.58%), Query Frame = 3 Query: 6 VDLVGLKET-RNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGL E R VTGVEMF+K LD A AGDN+G LLRGV + +I+RG VLAKPG+I PHTK+ A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG V E +MVMPGD IK+ V+LI P+A E+G+RFAIREGG+TVGAGV+ I E Sbjct: 248 VEIVGLNEKPRKTVVTGVEMFRKLLDFAQAGDNIGALLRGVDRKEIERGQVLAKPGSINPHTKYSAEVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGIV-----QLPEGVEMVMPGDNIKVDVDLITPIAIEEGLRFAIREGGRTVGAGVVTGIRE 400
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJR (Elongation factor Tu OS=Campylobacter jejuni (strain RM1221) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY+RTTDVTG + + +MVMPG+ +++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 247 TIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJJ (Elongation factor Tu OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY+RTTDVTG + + +MVMPG+ +++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 247 TIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJE (Elongation factor Tu OS=Campylobacter jejuni GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.647e-50 Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 3 Query: 3 TVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 T+++VG+K+T+ TVTGVEMF+K +D+ AGDNVG+LLRG +K ++ RGMVLAKP +ITPHT F A VY+L K+EGGRH+PFF YRPQFY+RTTDVTG + + +MVMPG+ +++ V LI PVA E+G RFAIREGGKTVG+GV+ II+ Sbjct: 247 TIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLA-----DGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK 399 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |