DC900270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_ACICJ (Elongation factor Tu OS=Acidiphilium cryptum (strain JF-5) GN=tuf PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.035e-49 Identity = 96/155 (61.94%), Postives = 119/155 (76.77%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 V++VGLK T TVTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VLA PG+ITPHT F VY+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E +MVMPGD + + VELI P+A ++G+RFAIREGG+TVG+GV+ SI Sbjct: 244 VEIVGLKATVKTTVTGVEMFRKLLDQGEAGDNIGALLRGTKREDVERGQVLAAPGSITPHTNFSGSVYILNKEEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPEGVEMVMPGDNVTVSVELIAPIAMDEGLRFAIREGGRTVGSGVVASI 393
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU1_STRAW (Elongation factor Tu 1 OS=Streptomyces avermitilis GN=tuf1 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.035e-49 Identity = 96/157 (61.15%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 3 TVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 TVD+VG+K E TVTG+EMF+K LDE AG+NVGLLLRG+++ D++RG V+ KPG++TPHT+F A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI PVA E+G++FAIREGG+TVGAG + I Sbjct: 244 TVDIVGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQVIIKPGSVTPHTEFEAQAYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMTVELIQPVAMEEGLKFAIREGGRTVGAGQVTKI 395
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS5 (Elongation factor Tu OS=Mycoplasma synoviae (strain 53) GN=tuf PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 93/157 (59.24%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VGLK T+ VTG+EMF+K L EA+AGDN GLLLRGV + D++RG VLAKPG+I PHT+F A +YVLKKEEGGRH+PFF Y+PQFY RTTDVTG V + + +MVMPG+ + + V+LI P+A E+G +F+IREGG+TVGAG + I++ Sbjct: 243 VEIVGLKPTKKTVVTGIEMFRKNLKEALAGDNAGLLLRGVNRDDVERGQVLAKPGSIVPHTEFEAAIYVLKKEEGGRHTPFFKNYKPQFYFRTTDVTGGV-----EFEAGREMVMPGENVNLKVKLISPIAVEEGTKFSIREGGRTVGAGSVTKIVK 394
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_METSB (Elongation factor Tu OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=tuf PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 95/157 (60.51%), Postives = 119/157 (75.80%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VGLK T VTGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD + M VELI P+A E+ +RFAIREGG+TVGAGV+ SI E Sbjct: 245 IEIVGLKPTVKTVVTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNVTMDVELIAPIAMEEKLRFAIREGGRTVGAGVVASITE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_JANSC (Elongation factor Tu OS=Jannaschia sp. (strain CCS1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 95/157 (60.51%), Postives = 117/157 (74.52%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 + +VG+++T T TGVEMF+K LD AGDN+G LLRGV + ++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V + ++MVMPGD +K VELI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 240 ISIVGIRDTTKTTCTGVEMFRKLLDRGEAGDNIGALLRGVDREGVERGQVLCKPGSVDPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTV-----NLPAGTEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_FUSNN (Elongation factor Tu OS=Fusobacterium nucleatum subsp. nucleatum GN=tuf PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 94/155 (60.65%), Postives = 118/155 (76.13%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 470 +++VG+K T T TGVEMF+K LD+ AGDN+G+LLRG +K +++RG VLAKPG+I PHT F VYVL K+EGGRH+PFF GYRPQFY RTTD+TG V+ + +MVMPGD I M VELI P+A EQG+RFAIREGG+TV +GV+ I Sbjct: 243 IEIVGIKPTTKTTCTGVEMFRKLLDQGQAGDNIGVLLRGTKKEEVERGQVLAKPGSIHPHTNFKGEVYVLTKDEGGRHTPFFTGYRPQFYFRTTDITGAVT-----LPDGVEMVMPGDNITMTVELIHPIAMEQGLRFAIREGGRTVASGVVSEI 392
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_DECAR (Elongation factor Tu OS=Dechloromonas aromatica (strain RCB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 91/157 (57.96%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 +++VG++ T TGVEMF+K LD+ AGDN+G LLRG ++ D++RG VL KPG++ PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E ++MVMPGD I M ++LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 245 IEIVGIRPTVKTICTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVLCKPGSVKPHTHFTSEVYILSKDEGGRHTPFFNGYRPQFYFRTTDVTGSI-----ELPEGTEMVMPGDNIAMTIKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BRUSU (Elongation factor Tu OS=Brucella suis GN=tufA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 94/157 (59.87%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LD+ AGDN+G L+RGV + D++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ SIIE Sbjct: 240 VEIVGIKATTKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREDVERGQVLCKPGSVKPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPAGTEMVMPGDNVAMDVTLIVPIAMEEKLRFAIREGGRTVGAGIVSSIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BRUSI (Elongation factor Tu OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=tuf1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 94/157 (59.87%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LD+ AGDN+G L+RGV + D++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ SIIE Sbjct: 240 VEIVGIKATTKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREDVERGQVLCKPGSVKPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPAGTEMVMPGDNVAMDVTLIVPIAMEEKLRFAIREGGRTVGAGIVSSIIE 391
BLAST of DC900270 vs. ExPASy Swiss-Prot
Match: EFTU_BRUO2 (Elongation factor Tu OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=tuf1 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.352e-49 Identity = 94/157 (59.87%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 6 VDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRIKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 476 V++VG+K T TVTGVEMF+K LD+ AGDN+G L+RGV + D++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAG++ SIIE Sbjct: 240 VEIVGIKATTKTTVTGVEMFRKLLDQGQAGDNIGALIRGVGREDVERGQVLCKPGSVKPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPAGTEMVMPGDNVAMDVTLIVPIAMEEKLRFAIREGGRTVGAGIVSSIIE 391 The following BLAST results are available for this feature:
BLAST of DC900270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900270 ID=DC900270; Name=DC900270; organism=Citrus sinensis; type=EST; length=885bpback to top |