CX043559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 2 Query: 11 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVR--PLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 427 P+D+DEA+ RRL +R+ + LPD +R+ +I + L E+ASDV++E +A +GYSG DL N+C A+ R S D+ P+ M DF+ A +V SVSS +E +W +G Sbjct: 393 PWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDAS----------MNGMRRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE--KWLSEFG 521
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNM 394 RP DLD A++RR+P R +N P RE I+++IL E + VDL +A DG+SGSDLK +C AA N S + ++RP++ D A E++ S + N+ Sbjct: 239 RPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA-------------LLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAFQNV 354
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNM 394 RP DLD A++RR+P R +N P RE I+++IL E + VDL +A DG+SGSDLK +C AA N S + ++RP++ D A E++ S + N+ Sbjct: 239 RPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA-------------LLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAFQNV 354
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 214 RP DLD A++RR+P R +N P+ R+ I+++IL E + S V+L IA DG+SGSDL+ +C AA Sbjct: 243 RPQDLDSAILRRMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAA 311
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 40/118 (33.90%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPLKMDDFKYAHEQV 361 RP DLD A++RR+P R +N P RE I+++IL E + VDL +A DG+SGSDLK +C AA N S + ++RP++ D A E++ Sbjct: 239 RPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA-------------LLCVREYVNSTSEESHDEDEIRPVQQQDLHRAIEKM 343
BLAST of CX043559 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 51/144 (35.42%), Postives = 68/144 (47.22%), Query Frame = 2 Query: 8 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDV-DLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXXNRASPPLYSSVDVRPL---KMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 427 RP +LDEAV RR RRL V LP R+KII ++ + + DV + +A + DGYSG+D+ LC A+ P +P ++ L MDDFK A + SVSSE E WNE+YG Sbjct: 396 RPQELDEAVRRRFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAP-----------------LRSLTPDQMEVIETHQLPAVTMDDFKQALRVISKSVSSEDCKQFE--AWNEIYG 520 The following BLAST results are available for this feature:
BLAST of CX043559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043559 ID=CX043559; Name=CX043559; organism=Citrus sinensis; type=EST; length=670bpback to top |