CX043529

Overview
NameCX043529
Unique NameCX043529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.928e-81
Identity = 146/212 (68.87%), Postives = 176/212 (83.02%), Query Frame = 2
Query:   65 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG RVLVVC+EIT   FRGP+    D+L+ Q LFGDGAAA
Sbjct:   16 AKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.928e-81
Identity = 149/212 (70.28%), Postives = 175/212 (82.55%), Query Frame = 2
Query:   65 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LKENPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRL K LAENNKGARVLVVCS IT   FRGP+    D+L+ Q LFGDG+AA
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKENPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKGLAENNKGARVLVVCSGITINIFRGPSLEQDDNLLAQCLFGDGSAA 225          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.321e-80
Identity = 151/225 (67.11%), Postives = 180/225 (80.00%), Query Frame = 2
Query:   32 LAMATVQEIRNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            + M T    R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAENNKGARVLVVCSE+    FRGP+    D+L+ Q LFGDG+AA
Sbjct:    5 VTMLTDTWSRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAA 229          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.554e-80
Identity = 144/214 (67.29%), Postives = 173/214 (80.84%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R  +R DG A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KLLGL  SV R MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D+L+ Q LFGDG+AA
Sbjct:   14 RREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAVMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.118e-79
Identity = 147/212 (69.34%), Postives = 175/212 (82.55%), Query Frame = 2
Query:   65 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SE + E KEKF+R+C+KS I+ R++ LTEE+LK++PN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRL KDLAENNKGARVLVVCSEIT   FRGP+    D+L+ Q LFGDG+AA
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAA 225          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.548e-79
Identity = 145/216 (67.13%), Postives = 178/216 (82.41%), Query Frame = 2
Query:   59 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+L++NP++C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD++LTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG R+LVVCSEIT   FRGP+    D+L+ Q LFGDG+AA
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAA 229          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.548e-79
Identity = 143/214 (66.82%), Postives = 172/214 (80.37%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R  +R +G A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KLLGL  SV R MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D L+ Q LFGDG+AA
Sbjct:   11 RREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAA 224          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.236e-78
Identity = 141/214 (65.89%), Postives = 175/214 (81.78%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R  +RA GP +VLAIG+A P +  +Q+ +PD+YF IT+S HM E+K KF RMC KS IKKR M++ E+IL+ +P++ +Y   SLD RQD++V EVPKLGK AA  AI EWGQPKS ITHLIFCT+SG+DMPGAD+ L KLLGLRP+V R M+YQQGCFAG TVLR+AKDLAENNKG+R+LVVCSE+T ++FRGP + H ++LVGQALFGDGAAA
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAENNKGSRILVVCSELTLISFRGPTEDHPENLVGQALFGDGAAA 228          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.135e-78
Identity = 143/205 (69.76%), Postives = 167/205 (81.46%), Query Frame = 2
Query:   86 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            A+VLAIGT  P H + Q DYPD+YFR T SEHMTELKEKFKR+C KS I+KR+ YLTEEILKEN  +  Y A SLDARQ I+  EVPKLG+EAA KAI EWGQP SKITH++F TTSG  MPGADY +T+LLGL  +V+R M+Y QGCFAGGT LR+AKDLAENN+GARVLVVC+E TA+TF  P ++HLD +VGQA+F DGAAA
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAMTFHAPNESHLDVIVGQAMFSDGAAA 224          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.976e-77
Identity = 134/221 (60.63%), Postives = 176/221 (79.64%), Query Frame = 2
Query:   38 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            M +++ I+ A RADG A++LAIG A P + + Q+ YPD+YFR+T SEH+ +LK+KF+R+C+K+ I+KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGADYQLT++LGL P+V+R M+YQQGCFAGGT LRLAK LAE+ KGARVLVVC+E T V FR P++ H D LV QALF DGA+A
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGADYQLTQILGLNPNVERVMLYQQGCFAGGTTLRLAKCLAESRKGARVLVVCAETTTVLFRAPSEEHQDDLVTQALFADGASA 221          
The following BLAST results are available for this feature:
BLAST of CX043529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSB_IPONI5.928e-8168.87Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOCO5.928e-8170.28Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTF1.321e-8067.11Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSC_IPOPU6.554e-8067.29Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPOTR1.118e-7969.34Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSB_IPOTR5.548e-7967.13Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPONI5.548e-7966.82Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
VPS_PSINU1.236e-7865.89Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
TBSYN_HYPAN6.135e-7869.76Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
BBS_PHASS3.976e-7760.63Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043529 ID=CX043529; Name=CX043529; organism=Citrus sinensis; type=EST; length=702bp
GAGCCTCAAAACATATTCATTACGGGTTTAACTTGCAATGGCAACCGTTC
AAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCC
ATCGGTACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGA
CTATTACTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGA
AGTTCAAGCGCATGTGTGACAAGTCAATGATTAAGAAGCGTTACATGTAC
TTAACGGAAGAGATTTTGAAGGAAAATCCCAACATGTGCGCTTACATGGC
TCCATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGC
TCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAG
TCTAAGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCC
CGGCGCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCA
AGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTT
CGCCTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGT
TGTCTGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTC
ATCTTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCT
GT
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