CX043512

Overview
NameCX043512
Unique NameCX043512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.779e-14
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P ++VF  D+PGL             VL ISG+RN E+E +   + R+ER  G F ++F LPE+A  D+I A  ++GVLTVTV K    +    + IQ+
Sbjct:   44 DARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQV 157          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14
Identity = 45/114 (39.47%), Postives = 61/114 (53.51%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P ++VF  D+PGL             VL ISG+R  E+E +   + R+ER  G F R+F LPENA  D I A  ++GVLTVTV K    +    + I++
Sbjct:   39 DAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEV 152          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.436e-13
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = -1
Query:  315 KETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVR 608
            +ET EA++FKADLPG+              + +SG+R  EK ++S+ ++  ER+ G FSR F LPE    D ++A ++NGVLT+T+PK  E +   ++
Sbjct:   59 RETKEAYIFKADLPGVDEKDIEVTLTGDR-VSVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPKRPEVQPKRIQ 155          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.216e-12
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIE-KEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D  E P+A+VF  D+PG+             VL +SG+R  + KE++   + R+ER  G F R+F+LP+NA +++I A+  +GVL VT+PK    +    + IQ+
Sbjct:   39 DAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQV 153          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P A+ F  D+PGL             VL +SG+R  E+ +    + R+ER  G F R+F LP+NA +D++ A   +GVLTVTV K    +    + I++
Sbjct:   48 DARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEV 161          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.588e-12
Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P ++VF+ D+PGL             +L I G+R  ++E +   + R+ER  G   R+F LPENA  D I A  ++GVL+VTV K    +    R IQ+
Sbjct:   43 DAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQV 156          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12
Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P ++VF  D+PG+             VL ISG+R  E+E +   + ++ER  G   R+F LPENA ++ I A  ++GVLTVTV K    +    + IQ+
Sbjct:   36 DAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQV 149          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12
Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = -1
Query:  300 ASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISG---QRNIEKE---DKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQIS 641
            ASA     +DW ETP +HV + ++PGL             VL + G       EKE   +K   WH  ER    F+R   LP   ++++I+AS++NGVLTV VPK     +   R I +S
Sbjct:   24 ASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 44/114 (38.60%), Postives = 61/114 (53.51%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P A+ F  D+PGL             VL ISG+R  E+ + +  + R+ER  G F R+F LP+NA MD+I A   +GVLTVTV K    +    + I++
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREEREDAK-YLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of CX043512 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = -1
Query:  303 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKSDTWH-RVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 644
            +A A   T  D KE P ++VF  D+PGL             VL ISG+R  E E+K    + R+ER  G   R+F LPENA  ++I A  ++GVLTVTV      +    R I++
Sbjct:   38 DAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEV 152          
The following BLAST results are available for this feature:
BLAST of CX043512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP21_HELAN3.779e-1439.4717.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP21_SOLPE8.418e-1439.4717.3 kDa class II heat shock protein OS=Solanum pe... [more]
SP21_STIAU1.436e-1338.78Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HS177_ARATH1.216e-1235.6517.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP22_MAIZE1.588e-1235.9617.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_SOYBN1.588e-1236.8417.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_PEA2.708e-1236.8417.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP16_ORYSJ2.708e-1235.8316.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_MAIZE3.537e-1238.6017.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_IPONI4.619e-1238.2617.2 kDa class II heat shock protein OS=Ipomoea ni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11E10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11E10-I19-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043512 ID=CX043512; Name=CX043512; organism=Citrus sinensis; type=EST; length=836bp
TTTTTTTTTTTTTTTTTACTGTGAATCTAATAGTCAATTTACTCAAATTG
TGTTACAACTATCAACAATACAAACGAAATCTAAAATCTCAGATGGAAAG
CAGGATTGACAGACAAACAGGCACACGAAGAGACAGCGTTACGAAATTAC
ATTATTATTCCCATTCTGACATTCCCATTACAAACAAAGACACTCGATCT
CAGTAGACAAAGACAGACTTCACATGATACATAGACCAAACCAAACCATA
AAACTTATCATACAATTATTTATTGTCTTTGTTTATTAATTAGTCAGCCA
GAGATTTGAATAGCCCTGACATTAGCTTTCTTGGCCTCCTCCGCTTTAGG
AACGGTAACAGTAAGCACACCGTTCTCCATTGAAGCCTTAATGCGGTCCA
TCTTCGCATTCTCCGGCAGCCTGAACCTCCTCGAGAACATGCCACTGCTA
CGCTCCACGCGATGCCACGTGTCGCTCTTGTCTTCCTTCTCAATGTTCCT
CTGCCCGCTTATCTGAAGCACCCTGTCATCCTCAACCTCGACCTTCACCT
CCTCTTTCCTTAGCCCCGGAAGATCAGCCTTGAACACGTGGGCCTCTGGG
GTTTCCTTCCAGTCCACGCGGGTATTAACGAAAGCAGAGGCTTCTCCAGG
GAACTGAGAGGACACCGCAGATGGAAAAGAAGAAGCAGAGAGAGGGAAGT
CCCTGAATGGATCCCAAACGTCGAGTGAGAACGGATCGAACACACTGCTG
CGTCGGTTGCCGAAGAAGCTTGGAATCAGCGACATTTTCCTTATCTTTCC
TTTTTTTGTTTTCCCTCTCTCTTTCCTCTATCGACT
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