DC900226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 142 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 375 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.468e-32 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 142 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 375 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H41_BLEJA (Histone H4-1 (Fragment) OS=Blepharisma japonicum PE=1 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 5.462e-30 Identity = 65/75 (86.67%), Postives = 73/75 (97.33%), Query Frame = 1 Query: 130 VLRDNIQGITKPAIRRLARRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 351 V+R+NIQGITKPAIRRLARRGGVKR +SGL+Y+ETR VLK+FLENV+RDAVTYTEHARRKTVTA+DVVYALKRQG Sbjct: 24 VIRENIQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLENVVRDAVTYTEHARRKTVTALDVVYALKRQG 98
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.133e-30 Identity = 63/78 (80.77%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 136 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 369 +D ++GITKPAIRRLARRGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRTLYG+ Sbjct: 40 QDALKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRTLYGY 117
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.030e-28 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 136 RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 369 +++I GITKPAIRRLARRGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRTLYGF Sbjct: 29 KEHINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRTLYGF 106
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H42_BLEJA (Histone H4 (Fragment) OS=Blepharisma japonicum GN=H4 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.720e-28 Identity = 61/75 (81.33%), Postives = 72/75 (96.00%), Query Frame = 1 Query: 130 VLRDNIQGITKPAIRRLARRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 351 V+R+N QGITKPAIRRLARRGGVKR +SGL+Y+ETR VLK+FLE+V+RDAVTYTEHA+R+TVTA+DVVYALKRQG Sbjct: 15 VIRENNQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLESVVRDAVTYTEHAKRETVTALDVVYALKRQG 89
BLAST of DC900226 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.161e-26 Identity = 63/77 (81.82%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 130 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 360 VL DNIQGITK IRRLAR GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRTL Sbjct: 22 VLSDNIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRTL 98 The following BLAST results are available for this feature:
BLAST of DC900226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900226 ID=DC900226; Name=DC900226; organism=Citrus sinensis; type=EST; length=895bpback to top |