DC900225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.231e-42 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTS-DDTKANSNGQCGINC 491 F LY+ KWT+LLIPPT++LI+NLVG+VAG S A+N GY++WGPLFGK+FFA WVI HLYPFLKGL+GRQNRTPTIVI+WSILLAS+FSL+WVR++PF S DT + S I+C Sbjct: 870 FGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINPFVSKTDTTSLSLNCLLIDC 985
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.100e-41 Identity = 74/115 (64.35%), Postives = 97/115 (84.35%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 F+ LY+FKWT+LLIPPTT+LI+N++G++ GVS AI++GY SWGPLFG+LFFA+WVI HLYPFLKG+LG+Q++ PTI++VWSILLASI +LLWVRV+PF + CG+NC Sbjct: 970 FSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNPFVAKGGPVLE--ICGLNC 1082
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41 Identity = 75/115 (65.22%), Postives = 96/115 (83.48%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 F+ LY+FKWTSLLIPPTT+LI+N++G++ G+S AI++GY SWGPLFG+LFFA WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 956 FSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1068
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.778e-40 Identity = 75/115 (65.22%), Postives = 96/115 (83.48%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 491 F+ LY+FKWTSLLIPP T+LI+N++G++ GVS AI++GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF + CG++C Sbjct: 971 FSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNPFVAKGGPILE--ICGLDC 1083
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.321e-27 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY+ KWTSL+IPP T+++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1035 FADLYIVKWTSLMIPPITIMMVNLIAIAVGFSRTIYSVIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.321e-27 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY+ KWTSL+IPP +++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1060 FADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.321e-27 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY+ KWTSL+IPP +++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS LLA SLLWV ++P Sbjct: 1060 FADLYIVKWTSLMIPPIVIMMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAINP 1156
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.726e-27 Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 482 FA LY KWTSL+IPP T++++NLV I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1015 FAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.726e-27 Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 482 FA LY KWTSL+IPP T++++NLV I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLW+ + P A +N Q G Sbjct: 1015 FAELYAVKWTSLMIPPLTIIMINLVAIAVGFSRTIYSTIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWIAIKP-----PSAQANSQLG 1121
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.254e-27 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY+ KWTSL+IPP T+++VNL+ I G S I S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV ++P Sbjct: 1035 FADLYMVKWTSLMIPPITIIMVNLIAIAVGFSRTIYSVVPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLVAITISLLWVAINP 1131 The following BLAST results are available for this feature:
BLAST of DC900225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900225 ID=DC900225; Name=DC900225; organism=Citrus sinensis; type=EST; length=830bpback to top |