DC900225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.469e-26 Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LYV KW+ L++PP T+++VN++ I G++ + S + W L G +FF+ WV+ HLYPF KGL+GR+ R PTIV VWS LL+ I SLLWV ++P Sbjct: 1072 FADLYVVKWSFLMVPPLTIMMVNMIAIAVGLARTLYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVFVWSGLLSIIVSLLWVYINP 1168
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY+ KWT L I P T++IVNLV IV G S I S WG L G +FF++WV+ H+YPF KGL+GR+ + PTIV VWS L++ SLLW+ + P Sbjct: 928 FADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITISP 1024
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.978e-24 Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCG 482 +A LY+ KW+SL+IPP + +VN++ IV I W L G FF+ WV+AHLYPF KGL+GR+ +TPTIV VW+ L+A SLLW ++P T A G G Sbjct: 996 YADLYIVKWSSLMIPPIVIAMVNIIAIVVAFIRTIYQAVPQWSKLIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVFVWAGLIAITISLLWTAINPNTGPAAAAEGVGGGG 1107
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.978e-24 Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG 473 +A LY+ KW+SLLIPP T+ +VN++ I + I S WG G FF+ WV+AHL PF KGL+GR+ +TPTIV VWS LL+ SLLWV + P +ANSNG Sbjct: 1034 YADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISP-----PEANSNG 1137
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.786e-24 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDP 437 FA LY +W+ L++PP T+++VN V I + + S + W L G FF+ WV+ HLYPF KGLLGR+ R PTIV VWS L++ I SLLWV ++P Sbjct: 1103 FAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINP 1199
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 461 FA LY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 904 FAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKA 461 FA LY+ KWTSL IPP V+ +N++ +V GVS + + + L G FF+ WV+AH YPF KGL+GR+ RTPTIV VW+ L++ SLLW+ + P DD+ A Sbjct: 904 FAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISP--PDDSVA 1006
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 431 FA LY+FKWT+L+IPP T++I+N+V I+ V + S W L G FFA WV+ H+YPF KGL+GR +TPT+V VWS L+A SLL++ + Sbjct: 872 FADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITI 966
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.043e-20 Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 168 KWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY-QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRT-PTIVIVWSILLASIFSLLWVRVDPFTS 446 +WT+LL+ PT+V++ NL G+VA V++ ++ GY QSWG L KL A WV+AHL FL+GLL ++R PTI ++WS++ S+ SLLWV F++ Sbjct: 754 RWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWVHAASFSA 848
BLAST of DC900225 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.208e-16 Identity = 34/95 (35.79%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 147 FAXLYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRV 431 +A LYV +WT L+I P +++VN++G + ++ + W + G +FF WV+ HLYPF KG+LG+ +TP +V+VW I ++L++ + Sbjct: 824 YADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINI 918 The following BLAST results are available for this feature:
BLAST of DC900225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900225 ID=DC900225; Name=DC900225; organism=Citrus sinensis; type=EST; length=830bpback to top |