DC900224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 4.993e-90 Identity = 152/221 (68.78%), Postives = 183/221 (82.81%), Query Frame = 1 Query: 4 IFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 666 I +E IEEG++ + E + +Q LEK+FGQSPV +A+T + GG+P NPASLL+E+I VISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH GW S+YCMP R AFKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY G LK LER +YIN++VYP TS+PL+ YC+LPA CLLT KFI+PEISN+A + F+L+F+SI TGILE++W Sbjct: 700 IHALEHIEEGLQVTNAENNSETAQLKLEKKFGQSPVLVASTLLLNGGVPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQW 920
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 4.993e-90 Identity = 158/222 (71.17%), Postives = 185/222 (83.33%), Query Frame = 1 Query: 4 IFNMEDIEEGVEGYDDE-RSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 666 I +E+IEEG +G +D +S +Q LEK+FGQSPVF+A+ ME GG+ +PASLL+EAI VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH+ GW S+YC P PAFKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY G LK LERL+YIN++VYP TSIPL+ YC+LPA CLLT KFI+PEISN+AS+ F+ LF SI TGILE++W Sbjct: 681 IHALENIEEGTKGTNDAAKSPEAAQLKLEKKFGQSPVFVASAGMENGGLARNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQW 902
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.478e-89 Identity = 154/225 (68.44%), Postives = 184/225 (81.78%), Query Frame = 1 Query: 4 IFNMEDIEEGV--EGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 I +E+++EGV + E+ +Q LEK+FGQSPVF+A+ ++ GG+P +PA LL+EAI VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH GW S+YCMP R AFKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY G LK LER +YIN++VYP TS+PLI YC+LPA CLLT KFI+PEISN+A + F+L+FISI TGILE++W G Sbjct: 694 IHALENVDEGVIVPVSNVEKRSEATQLKLEKKFGQSPVFVASAVLQNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGG 918
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 1.606e-88 Identity = 157/223 (70.40%), Postives = 182/223 (81.61%), Query Frame = 1 Query: 4 IFNMEDIEEG--VEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 666 I +E+IEEG +G + E+S Q LEK+FGQSPVF+A+ ME GG+ +PA LLKEAI VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH+ GW S+YC P AFKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY G LK LERL+YIN++VYP TS+PLI YC+LPA CLLT KFI+PEISN+AS+ F+ LF SI TGILE++W Sbjct: 695 IHALENIEEGRVTKGSNVEQSTEAMQMKLEKKFGQSPVFVASARMENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQW 917
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49 Identity = 108/238 (45.38%), Postives = 151/238 (63.45%), Query Frame = 1 Query: 22 IEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFME--QG------------------GIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPP-RPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 IE+ G D E S + L KRFG S F+A+ + QG +P A+ + EAI VISC YE+KTEWG+ IGWIYGSVTED++TG++MH RGW S+YC+ P R AF+G+APINL+DRL+QVLRWA GS+EI SR+ ++ + R+KLL+R+AY N +YP TS+ L+AYC LPA L + KFI+ +S + +++ +++ +LEI+WSG Sbjct: 808 IEDDDGGADIEASAM-----LPKRFGGSATFVASIPVAEYQGRLLQDTPGCHHGRPAGALAVPREPLDAATVAEAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSG 1038
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49 Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 1 Query: 43 YDDERSLLMSQKSLEKRFGQSPVFI----AATFMEQ---------GGIPP--TTNP-----ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 YDDE M+ + K+FG S I A F + G PP T P AS + EAI VISC YEDKTEWG IGWIYGSVTED++TG++MH RGW S+YC+ R AF+G+APINL+DRL+QVLRWA GS+EI SR+ + + ++K+L+R+AY+N +YP TSI LI YC LPA L + +FI+ ++ ++ +++ I++ +LEI+WSG Sbjct: 756 YDDEE---MNLSLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSG 980
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.470e-49 Identity = 91/176 (51.70%), Postives = 127/176 (72.16%), Query Frame = 1 Query: 145 IPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 +P A+ + E++ VISC YEDKTEWG +GWIYGSVTED++TG++MH RGW S+YC+ R +F+GSAPINL+DRL+QVLRWA GS+EI SR+ I + RLK L+RLAY+N +YP TS+ LI YC LPAF L + +FI+ +S ++ +++ I + +LE++WSG Sbjct: 768 VPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIL--ASKRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSG 941
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49 Identity = 108/234 (46.15%), Postives = 147/234 (62.82%), Query Frame = 1 Query: 31 GVEGYDDERSLLMSQKSLEKRFGQSPVFI----AATFME---------QGGIPP--TTNP-----ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 G + DDE M+ + K+FG S I A F Q G PP T P AS + EAI VISC YEDKTEWG IGWIYGSVTED++TG++MH RGW S+YC+ R AF+G+APINL+DRL+QVLRWA GS+EI SR+ + + R+K+L+R+AY+N +YP TS LI YC LPA L + +FI+ ++ ++ +++ I++ +LEI+WSG Sbjct: 752 GGDSDDDEE---MNLSLVPKKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPGALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFF--ASPRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSG 980
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49 Identity = 89/176 (50.57%), Postives = 130/176 (73.86%), Query Frame = 1 Query: 145 IPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 IP T AS++ EAI V+SC YE+KTEWG +GWIYGSVTED++TG++MH RGW S+YC+ R AF+G+APINL+DRL+QVLRWA GS+EI SR+ ++ + ++K+L+R+AY+N +YP TS+ LI YC LPA L + +FI+ ++ + +++ I++ +LEI+WSG Sbjct: 787 IPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSG 960
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49 Identity = 89/176 (50.57%), Postives = 130/176 (73.86%), Query Frame = 1 Query: 145 IPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 IP T AS++ EAI V+SC YE+KTEWG +GWIYGSVTED++TG++MH RGW S+YC+ R AF+G+APINL+DRL+QVLRWA GS+EI SR+ ++ + ++K+L+R+AY+N +YP TS+ LI YC LPA L + +FI+ ++ + +++ I++ +LEI+WSG Sbjct: 787 IPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALF--ASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSG 960 The following BLAST results are available for this feature:
BLAST of DC900224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900224 ID=DC900224; Name=DC900224; organism=Citrus sinensis; type=EST; length=676bpback to top |