DC900224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.384e-29 Identity = 76/198 (38.38%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 70 SQKSLEKRFGQSPVF--IAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILE 657 S K L RFG S A + P + +S ++ A V +C Y+ T WG+E+GW+YGS+TEDILTG ++HA GW S+ + PAF GSAPI L Q RWA G EI++SR+ PI RLK + LAY+ + +PL + + Y L +C+LTN+ +P+ S + LFIS +E Sbjct: 402 SYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFME 599
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 78/213 (36.62%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 4 IFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFI-AATFMEQGGIP--PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFIS 633 I+ M EG GY S K L +FG S F +A + G + P + +S + A V +C YE T WG+E+GW+YGS+TED+LTG ++HA GW S PAF G AP L Q+ RWA G +EIL+SR+ PI L+ + LAY+++ V+P+ + + Y L +CLL+N+ +P+ S + LFI+ Sbjct: 375 IYGMRTGREGTTGYS-------SNKELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFELCYALLGPYCLLSNQSFLPKTSEDGFYIALALFIA 580
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 63/168 (37.50%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 172 LLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGG 675 +L A V C YE T WG +IG+ YGS+ ED TGF +H GW SI+C P + AF G +P L+D + Q +RW++G +E+ SR+ P+ YG L LL L Y + +P IPL+ Y LP L+ + P+ S+ +I+LF+ +A + + GG Sbjct: 405 ILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIK-PLSLLMSLGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGG 571
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 1 Query: 160 NPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGG 675 N +L A V C YE T WG +IG+ YGS+ ED TG+++H GW S++C P R AF G +P +L D ++Q RWA+G +E+ +SR+ PI YG + L+ + Y + S+PLI Y LP LL + P+ S+ +I+LF+ + +L+ GG Sbjct: 430 NAQDVLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYGVKS-MGLVTGVGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGG 600
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 65/168 (38.69%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 172 LLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGG 675 +L A +V C YE T WG +IG+ YGS+ ED TGF +H GW S++C P + AF G +P L D + Q +RWA+G E+ S++ PI YG L LL L Y N+ P SIPL Y LP L++ + P+ S+ +I+LF +A + + GG Sbjct: 415 VLSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYGIKS-LDLLMGLGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGG 581
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 64 LMSQKSLEKRFGQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVIS----CGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPE 588 L+++ SL FG S + + P NP ++L +I C YE +T WGK IGW+Y S++ED+ T +H+RGW S Y P PAF GS P + + Q RWA GSIE+L ++ P+ + +L+ +R+AY+ + + SIP + YC LPA+CLL N + P+ Sbjct: 392 LLAEDSLSSGFGNSKEMVTSVVEALQRKP---NPQNILTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSPLLGLFCRKLRFRQRVAYL-CVSICVRSIPELIYCLLPAYCLLHNSALFPK 566
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 64/175 (36.57%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 67 MSQKSLEKRFGQSPVFIAATFMEQGGIP-PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPE 588 ++++SL + FG S + + P P N L+ A + C YE +T WGK IGW+Y S TED+ T +H+RGW S Y P PAF G P + + Q RWA G +EIL ++ P+ + +++ + LAY+ + L SIP + YC LPA+CLL N + P+ Sbjct: 393 LAEESLTREFGNSKEMVKSVVDALQRKPFPQKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPK 567
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.600e-27 Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 199 SCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILL-FISIFAT--GILEIRWSGG 675 SC YE+ T+WGKE+G YG ED++TG + RGW S Y P + AF G AP NL L Q RW+ G +I+LS++ P+WYG G++ L L Y ++ +S+P++ Y L + CL + P++S S WFI ++++ AT + E W GG Sbjct: 420 SCTYEENTQWGKEMGVKYGCPVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYG-KGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVS---SSWFIPFGYVTVAATAYSLAEFLWCGG 577
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 66/175 (37.71%), Postives = 99/175 (56.57%), Query Frame = 1 Query: 67 MSQKSLEKRFGQSPVFIAATFME-QGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPE 588 +S+ SL +++G S + + Q P + A+L++ A V C YE +T WG +GW+Y SV ED T +H RGW S + P PAF GS P + + Q RWA GSIE+L ++ P+ G+ ++K +RLAY ++ + SIP + YC LPA+CLL N + P+ Sbjct: 393 LSEDSLVRKYGSSKELVKSVVDALQRKSNPQKSLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPL-IGFRRKIKFRQRLAYF-WVLMCIRSIPELVYCLLPAYCLLNNSALFPK 564
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 67 MSQKSLEKRFGQSPVFIAATFMEQGGIP-PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPE 588 +++++L + FG S + + P P A+ L+ A V C +E +T WGK IGW+Y S ED T +H+RGW S Y P PAF G+ P + + Q RWA G +E+L ++ P+ + +++ + LAY+ + L SIP + YC LPA+CLL N + P+ Sbjct: 393 LAEENLAREFGNSNEMVTSVVEALQRKPNPQNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPK 567 The following BLAST results are available for this feature:
BLAST of DC900224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900224 ID=DC900224; Name=DC900224; organism=Citrus sinensis; type=EST; length=676bpback to top |