DC900224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 65/175 (37.14%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 67 MSQKSLEKRFGQSPVFIAATFME-QGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPE 588 +++ SL +++G S + + Q P + A+L++ A V C YE +T WG +GW+Y SV EDI T +H RGW S + P PAF GS P + + Q RWA G+IE+L ++ P ++G++K +RLAY ++ L SIP + YC LPA+CLL + + P+ Sbjct: 393 LAEDSLVRKYGNSKELVKSVVDALQRKSNPQKSLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHGKIKFRQRLAYFWALMC-LRSIPELIYCLLPAYCLLHDSALFPK 565
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 8.120e-24 Identity = 61/161 (37.89%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 151 PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFIS 633 P + +S ++ A V SC YE T WG E+GW YGS+TEDILTG ++HA GW S PAF G AP L Q RWA G EIL+S++ P+ L+ + LAY+ V+ + + Y L +CLLTN+ + + S + LF++ Sbjct: 462 PIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVELCYELLVPYCLLTNQSFLSKASENCFNITLALFLT 622
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.086e-23 Identity = 56/165 (33.94%), Postives = 93/165 (56.36%), Query Frame = 1 Query: 178 KEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSG 672 ++A +++C YE +T+WG +IG YG EDI+TG +H RGW S + P R AF G AP L+ + Q RW+ G++ I LS++C +G+ G++KL ++ Y ++ S+P + Y +P+ L+ + P+I + + FI +F G+ E SG Sbjct: 421 EKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGH-GKIKLQLQMGYCICGLWAANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSG 584
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.819e-22 Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 178 KEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLF 627 ++A + +C YE +T+WG EIG YG ED++TG +H RGW S+Y P R AF G AP L+ + Q RW+ G+ I LS+H +G+ G++ L ++ Y ++ S+P I Y +PA L+ + PEI + + FI +F Sbjct: 416 EKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGH-GKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVF 564
BLAST of DC900224 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 52/142 (36.62%), Postives = 75/142 (52.82%), Query Frame = 1 Query: 193 VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFI 618 +++C YE T WG E G YG ED+ TG ++ RGW S+Y P R F G P +L L RW G ++I LSR+ P G+ G++KL ++ Y + + S P + Y T+P+ C L + PE + S WFI Sbjct: 433 LVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGH-GKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKT---SPWFI 570 The following BLAST results are available for this feature:
BLAST of DC900224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900224 ID=DC900224; Name=DC900224; organism=Citrus sinensis; type=EST; length=676bpback to top |