DC900223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.693e-58 Identity = 83/156 (53.21%), Postives = 109/156 (69.87%), Query Frame = 3 Query: 213 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGG 680 DG L L+LD SG+GF S ++L+GK +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT FHTY + WN ++++F VD PIR N E G+PFP Q M +Y+S+W A+ WAT+GG Sbjct: 48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGG 203 HSP 2 Score: 58.151 bits (139), Expect = 6.693e-58 Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 952 T GG KTDWS APF A Y+ ++++ C A+ C +++ W+ + +L+ + ++ V++ +++Y+YC D RFP +P EC Sbjct: 200 TRGGLEKTDWSKAPFTAFYRNYNVEGC------VWANGKSSCPANSS---WFTQ----QLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.484e-57 Identity = 82/155 (52.90%), Postives = 109/155 (70.32%), Query Frame = 3 Query: 216 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGG 680 G L L+LD SG+GF S ++L+GK +Q+KLV G+SAGTVT FY+ S G +E DFEFLGN +G PY + TNVY G G++EQ+ LWFDPT FHTY + WN ++++F VD PIR N E +G+PFP Q M +Y+S+W A+ WAT+GG Sbjct: 44 GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGG 198 HSP 2 Score: 56.6102 bits (135), Expect = 1.484e-57 Identity = 28/95 (29.47%), Postives = 53/95 (55.79%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 952 T GG KTDWS APF A Y+ ++++ C + C ++++ W+ + +L+ + ++ V++ +++Y+YC+D RFP +P EC Sbjct: 195 TRGGLEKTDWSKAPFTAYYRNYNVEGC------VWVNGKSVCPANSQ---WFTQ----KLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.076e-56 Identity = 87/179 (48.60%), Postives = 120/179 (67.04%), Query Frame = 3 Query: 153 SSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 S FDD Y +W ++V G ++L+LD+ SG+GF SK+ Y G I+IK+ D++G VTAFY++S G H+E DFEFLGN G+ VQTNV+ NG GNREQ+L LWFDP+K+FHTY++LWN Q+V VD P+RV N +G+ +P + M V S+WN ++WAT GG+ Sbjct: 35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGK 211 HSP 2 Score: 64.6994 bits (156), Expect = 6.076e-56 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKK--CSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTEC 952 T GG+ K +WS APF A+++GF+ C NA+K C SSA +WW+ + S+L+ + VR ++ YDYC+D RF P+EC Sbjct: 207 TDGGKSKINWSLAPFKANFQGFNNSGC--------FTNAEKNACGSSA---YWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 291
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 9.370e-54 Identity = 85/200 (42.50%), Postives = 133/200 (66.50%), Query Frame = 3 Query: 102 MSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY---DGDT--LKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSS-DGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 +S+ ++ V L ++A F + + A DHV+ DG T + L LD SG+GF SK YLFG+ S+Q+KLVGG+SAGTVT+FY+SS +G H+E D EF+GN +G PY++ TNV+ NG G +E + LWFDPT +FHTY ++WN + ++F VD+ P+R T ++ + +P+ + M +++++W+ WAT+ G+ Sbjct: 7 LSVAAAVAVSWLAASSAAAAGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVR--TFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGD 204 HSP 2 Score: 55.8398 bits (133), Expect = 9.370e-54 Identity = 36/99 (36.36%), Postives = 48/99 (48.48%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLS----ELNVHQSHQLMWVRANHLIYDYCTDTSRFP-AIPTEC 952 T G VK DWS APF+ SY+G+ +AC + A SSS W E T + EL+ + + W N++ Y+YC D RFP P EC Sbjct: 200 TRHGDVKIDWSGAPFVVSYRGYSTNAC------VNNNPAGGWSSS-----WCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAEC 287
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 4.002e-45 Identity = 82/203 (40.39%), Postives = 117/203 (57.64%), Query Frame = 3 Query: 120 LFVGLLMVVLVSSAKFDDLYQTSWAFDHVQYDGD----------TLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR--EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 +F+ +L + L SS+ F +L S+ GD +++L LD Y+G+GF S + Y G S IKL +AG V AFY S+ H+E D EFLGN G+P+ QTN+Y NG +R E+R LWFDP+KEFH YS+LW +++F VD+ PIR + G +P + M +Y++IW+A DWAT GG+ Sbjct: 9 IFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGK 210 HSP 2 Score: 57.3806 bits (137), Expect = 4.002e-45 Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACEC-PASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECV 955 T GG+ K ++ APF+A +K F +D C P D CS S + + + S +N HQ + R + Y YC DT R+P ECV Sbjct: 206 TSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMD----CSDSVD---FLESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPECV 294
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.507e-44 Identity = 81/185 (43.78%), Postives = 115/185 (62.16%), Query Frame = 3 Query: 150 VSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN---HNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR-----EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGG 680 V ++ FD ++T W H + + D + L LD +G+GF S Y G IKL G +AG T+ Y+S++ + H+E D EFLG T G+PY +QTNV+V G G+R E + LWFDPT++FH Y++LWN Q+VF VD+ PIR + N +++ I FP + M VY SIW+A DWAT+ G Sbjct: 34 VPTSPFDREFRTLWGSQHQRREQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTY-NRKNEAI-FP-TRPMWVYGSIWDASDWATENG 215 HSP 2 Score: 48.9062 bits (115), Expect = 1.507e-44 Identity = 31/96 (32.29%), Postives = 42/96 (43.75%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKC--SSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTEC 952 T GR+K D+ + PF+A YK F + C AD++ C S A R L+ Q L W + N L+Y+YC D R EC Sbjct: 212 TENGRIKADYRYQPFVAKYKNFKLAGCT-------ADSSSSCRPPSPAPMR-------NRGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 6.122e-43 Identity = 75/162 (46.30%), Postives = 102/162 (62.96%), Query Frame = 3 Query: 213 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNR--EQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 D +++L LD Y+G+GF S S Y G S IKL G +AG V AFY S+ +H+E D EFLGN G+P+ QTN+Y NG NR E+R LWFDP+KEFH YS+LW +++F VD+ PIR E +P+ + M +Y++IW+A WAT GG+ Sbjct: 58 DDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGK 218 HSP 2 Score: 50.447 bits (119), Expect = 6.122e-43 Identity = 30/103 (29.13%), Postives = 46/103 (44.66%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAK--------KCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECV 955 T GG+ D++ +PF++ +K +D C S G +N CS S + D T+S Q+ + R ++ Y YC DT R+ P ECV Sbjct: 214 TSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSVSDQFLMSNDYSTISP---KQATAMRRFRERYMYYSYCYDTIRYSVPPPECV 313
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.637e-42 Identity = 86/201 (42.79%), Postives = 116/201 (57.71%), Query Frame = 3 Query: 102 MSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGN--REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 MSL SL G + L +FD+ Y + + V DG +++L LD +G+GF S YL G S IKL SAG V AFY+S+ NH+E DFEFLGN G + +QTN+Y NG + RE+R +LWFDPT++FH YS+LW+ ++F VD PIR G FP + M +YS+IW+ WAT GG+ Sbjct: 11 MSLFTSLVSGFALQKL-PLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGK 209 HSP 2 Score: 41.9726 bits (97), Expect = 6.637e-42 Identity = 22/95 (23.16%), Postives = 42/95 (44.21%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECV 955 T GG+ ++ +AP+++ + + C +V + C A + SE+ Q +++ R H+ Y YC D R+ + +ECV Sbjct: 205 TDGGKYGVNYKYAPYVSQFTDLILHGC----AVDPTEKFPSCKDEAVQNL----RLASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVLSECV 291
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.185e-41 Identity = 82/208 (39.42%), Postives = 120/208 (57.69%), Query Frame = 3 Query: 90 SMAKMSLIFSLFVGLLMVVLVSS---AKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFDFEFLGNTTGEPYLVQTNVYVNGV--GNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 +++++ + SLF GL+ + + F++ Y + + V DG +++L LD +G+GF S YL G S IKL +AG V AFYMS+ NH+E DFEFLGN + + VQTN+Y NG RE+R +LWFDPT++FH YS+LW+ ++F VD PIR G FP + M +Y++IW+ WAT GG+ Sbjct: 3 TLSRLLVFMSLFSGLVSGFALQNLPITSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGK 209 HSP 2 Score: 38.1206 bits (87), Expect = 7.185e-41 Identity = 23/95 (24.21%), Postives = 40/95 (42.11%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECV 955 T GG+ ++ +AP+IA + + C V + +C A + D E+ Q ++ R + Y YC D +R+ +ECV Sbjct: 205 TNGGKYGVNYKYAPYIARFSDLVLHGCP----VDPIEQFPRCDEGAAE----DMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSECV 291
BLAST of DC900223 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.196e-41 Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 150 VSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN---HNEFDFEFLGNTTGEPYLVQTNVYVNGVGN-----REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGE 683 V S F ++ W H + D + L + LD SG+GF S + G IKL G +AG +T+ Y+S++ + H+E D EFLG T G+PY +QTNVY+ G G+ RE + LWFDPTK+FH Y++LW+ R+++FLVD+ PIR + P + M +Y SIW+A WAT+ G+ Sbjct: 38 VGSLNFYKGFRNLWGPQHQRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPL---RPMWLYGSIWDASSWATEDGK 220 HSP 2 Score: 41.9726 bits (97), Expect = 7.196e-41 Identity = 27/95 (28.42%), Postives = 40/95 (42.11%), Query Frame = 2 Query: 671 TGGGRVKTDWSHAPFIASYKGFDIDACECPASVAGADNAKKCSSSAEKRFWWDEPTLSELNVHQSHQLM-WVRANHLIYDYCTDTSRFPAIPTEC 952 T G+ K D+ + PF A Y F C +S +C + P S Q HQ M WV+ + ++Y+YC D R ++ EC Sbjct: 216 TEDGKYKADYKYQPFTAKYTNFKALGCTAYSSA-------RCYPLSAS------PYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPEC 297 The following BLAST results are available for this feature:
BLAST of DC900223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900223 ID=DC900223; Name=DC900223; organism=Citrus sinensis; type=EST; length=1178bpback to top |