CX043461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.356e-37 Identity = 86/212 (40.57%), Postives = 119/212 (56.13%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 1.771e-37 Identity = 83/181 (45.86%), Postives = 112/181 (61.88%), Query Frame = 3 Query: 267 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 T GL FG++RV +TP+ E G +G A+ A+ G R IAE+ F D+I FDQ++N+ AKFRY G + +TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +PV FFE K Y + EVPED Y +PL +A++ REG+D+TL G Q++ +A Sbjct: 54 TKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQV-PITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMK-GEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEA 232
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.269e-35 Identity = 81/209 (38.76%), Postives = 116/209 (55.50%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 782 +N A+N A+ +ALE D R T GL ++G RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + L VR P G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR +E+P D Y +P+ EA +I EGS++T+V +G Sbjct: 6 VNNIEALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAP-LVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSYG 213
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.823e-35 Identity = 78/208 (37.50%), Postives = 117/208 (56.25%), Query Frame = 3 Query: 162 NLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 782 N A+ A+ +ALE DP R T GL ++G+ RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + C + VR P G +HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E+P D Y +P+ +A +I +G+++T+V +G Sbjct: 8 NNIEALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQGNNLTIVSYG 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.095e-34 Identity = 80/171 (46.78%), Postives = 102/171 (59.65%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+PED+Y++PL +AEV+R+G DIT++ Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPEDEYLIPLDKAEVVRKGKDITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.551e-33 Identity = 78/179 (43.58%), Postives = 104/179 (58.10%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 797 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S +VPE +P +A+++REGS +T+V + Q+ + Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKC-PIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPETIEPIPFGQAKILREGSSVTIVTFSIQVKL 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.456e-33 Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 797 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S+A++++EGS++T+V + Q+ + Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.456e-33 Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 797 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S+A++++EGS++T+V + Q+ + Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.456e-33 Identity = 77/179 (43.02%), Postives = 104/179 (58.10%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 797 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S +VP+ +P +A+++REGS +T+V + Q+ + Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF-DVPKTIEPIPFGQAKILREGSSVTIVTFSIQVKL 214 The following BLAST results are available for this feature:
BLAST of CX043461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043461 ID=CX043461; Name=CX043461; organism=Citrus sinensis; type=EST; length=813bpback to top |