CX043461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.456e-33 Identity = 76/174 (43.68%), Postives = 98/174 (56.32%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 782 + T GL FG RV +TP+ E G G +G A G R I E ++ A DQI+N AAK Y SG Q + R P GA HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S E DD++LP+ +A + R G D TLV +G Sbjct: 173 KVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRTGKDATLVSFG 345
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.456e-33 Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3 Query: 153 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 +SL + A+N L AL DP+ R T GL FG SRV +TPL E GIVG AIGLA G R + EIQF ++FP FDQI + AK R + + +R P+G GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y EV + LPL + ++R G+D T+V W + + +A Sbjct: 15 QSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSM-PVVIRIPHG--GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY-WPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRA 232
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 4.514e-33 Identity = 80/172 (46.51%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 267 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWG 782 T GL + G R+ +TPL E VG AIG AA G R IAE+ F D++ FDQI N+AAKFRY G + + +RA GA HSQ F H+PGLKVV P +P KGLL+ IRD +PV+F E K LY L EVPE Y +P EA ++R+G D+++V +G Sbjct: 52 TKGLYAKHG-DRLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAETP-VVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLE-GEVPEGAYAIPFGEANIVRDGKDVSIVTYG 220
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.895e-33 Identity = 77/204 (37.75%), Postives = 113/204 (55.39%), Query Frame = 3 Query: 165 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 LY A+N+ +H +E DP+ + + T GL +++G R+ +TP+ E G AIG A G R I E ++ AF+QI N A Y SG F L VR P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + E +P+ +Y++PL +AE++R G+ IT++ Sbjct: 6 LYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTP-LVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENIPQKEYLVPLEKAELVRSGNQITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.991e-32 Identity = 77/171 (45.03%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L EE+P+++Y LPL++ E +R+G DIT++ Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPQEEYFLPLNKVEFVRKGKDITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.518e-32 Identity = 77/183 (42.08%), Postives = 105/183 (57.38%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 + T L ++G RV +TP+ E +G AIG A G R I E ++ AF+QI N A RY SG F + +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L +E+P D+Y LPL +AE++R+G D+T++ + + QA Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQA 219
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.452e-31 Identity = 76/211 (36.02%), Postives = 112/211 (53.08%), Query Frame = 3 Query: 153 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLV 773 K + + A+N A+ + DP+ + + T GL +++G RV++TP+ E G G +G A G + + E ++ A D I+N AAK Y S Q N + R P GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY S EE + + LP+ +A++ REG D+T+V Sbjct: 34 KEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIV 243
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.518e-31 Identity = 80/218 (36.70%), Postives = 117/218 (53.67%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 L +Y A+ +A+ + D R + + T L ++G RV +TP+ E G AIG A G + + E ++ AF+QI N A Y SG ++ L +R P G HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L +E+P+ +Y+LPL +A+V+REGSD+T++ + L + QA Sbjct: 5 LFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-QEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQA 220
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.738e-30 Identity = 71/179 (39.66%), Postives = 102/179 (56.98%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSI 797 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ A D IVN AAK Y SG Q C + R P GA HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY S ++ E+ +P +A+V++EG +T+V + Q+ + Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRC-PIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSF-DISENVEPIPFGKAKVLKEGDSVTIVTFSIQVKL 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_ZYGCR (Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema circumcarinatum GN=pdhB PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 6.101e-30 Identity = 75/204 (36.76%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 165 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 L+ A+ Q L ++ DPR + T G A+R+G R+ +TP+ E G AIG A G R + E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++ FE LY L E++ E++Y++ L +AEV+R G+DIT++ Sbjct: 6 LFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYNLK-EDLAEEEYLVCLEKAEVVRPGNDITIL 207 The following BLAST results are available for this feature:
BLAST of CX043461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043461 ID=CX043461; Name=CX043461; organism=Citrus sinensis; type=EST; length=813bpback to top |