CX043461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29 Identity = 80/213 (37.56%), Postives = 114/213 (53.52%), Query Frame = 3 Query: 147 SGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLV 773 S K++ + A+N A+ L+ D + + + GL DRFG+ RV +TP+ E G G A+G A G + I E ++ A D +VN AAK Y SG C + R P GA G HSQ ++ +PGLKV++P S A+GLL + IRDPNPVVF E + LY S EE ++ LP +A++ REG+DI++V Sbjct: 35 STKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQ-MVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIV 245
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.359e-29 Identity = 81/238 (34.03%), Postives = 120/238 (50.42%), Query Frame = 3 Query: 102 CANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGW--GAQLSI 797 C N + + + ++ + A+NQA+ ++ D R + + + GL + G RV +TP+ E G G A+G A G R I E ++ A DQI+N AAK Y S + + R P GA HSQ A++ H PGLKVV P S AKGLL + IRD NPVVF E + LY S +EV DD+++P+ +A++ R G +T+V + G + S+ Sbjct: 6 CGNLFVARLAGTSTRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVP-IVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSL 242
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.028e-29 Identity = 79/219 (36.07%), Postives = 114/219 (52.05%), Query Frame = 3 Query: 153 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ-FNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLS 794 K + + AIN AL L D + + + T GL D++G R+ +TP+ E G G +G A G R I E ++ A D I+N +AK Y SG + FN + R P G G HSQ A++ VPGLKVV P S +GLL S IRD NPVV+ E + LY ++ + +Y++P+ +A+V REG D+T+VG+ +S Sbjct: 27 KEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFN--PIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVS 243
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.954e-29 Identity = 79/209 (37.80%), Postives = 112/209 (53.59%), Query Frame = 3 Query: 165 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQ 788 L+ A+ +A+ +E + R + T GL ++GK RV +TP+ E VG A+G AA G + E +I A+ QI N SG F + +R P G G HSQ E++F VPGL++V +P AKGLL S IR NP++F E LY L EVP++DY+LPL +AE++REGSDIT++ + Q Sbjct: 6 LFEALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVP-MVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYNLK-GEVPDNDYLLPLEKAELVREGSDITVLTYSRQ 212
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29 Identity = 69/178 (38.76%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLS 794 + T GL FG RV +TP+ E G G +G A G R + E ++ A D I+N AAK Y SG Q C + R P GA G H+Q+ ++ VPGL V+ P AKGLL + IR +PVVF E + LY + + DD++LP+ +A +IREG D+T+V + +S Sbjct: 174 KVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCP-IVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMDDFVLPIGKARIIREGKDVTIVSYSIGVS 350
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAPU (Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum punctulatum GN=pdhB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.809e-29 Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 165 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 L+ A+ + L ++ DP+ + T G A+++G R+ +TP+ E G AIG A G R + E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P AKGL+ S IR NPV+ FE LY L E +P+++Y++ L +AE++R G+DIT++ Sbjct: 6 LFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK-ETIPDNEYLVCLEKAEIVRPGTDITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CHAGL (Pyruvate dehydrogenase E1 component subunit beta OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.503e-28 Identity = 76/204 (37.25%), Postives = 108/204 (52.94%), Query Frame = 3 Query: 165 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 L+ A+ AL ++ DP + T G +++G R+ +TP+ E G AIG A G R I E ++ AF+QI N A Y SG F + +R P G G HSQ E++F VPGL++V +P KGLL S IR+ NPV+FFE LY L+ E + E +Y+L L +AEV+R G+DIT++ Sbjct: 6 LFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENSFTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIP-IVIRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYNLN-ENLIEQEYLLCLEKAEVVRPGNDITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.962e-28 Identity = 77/237 (32.49%), Postives = 121/237 (51.05%), Query Frame = 3 Query: 75 LSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPLSEAEVIREGSDITLV 773 L R L++ACA +Q +++ G ++ + A+N AL ++ D R + + + GL ++G R+++TP+ E I G ++G A G R I E ++ D I+N AAK Y S +F+ + R GA HSQ A+F H PG+KVV+P A+GLL + +RD NPV+ E + LY + PE D++LP +A++ R G DIT+V Sbjct: 9 LLRNGLTSACALEQSVRRLASGT---LNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVP-IVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIV 241
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.563e-28 Identity = 82/245 (33.47%), Postives = 120/245 (48.98%), Query Frame = 3 Query: 54 LRRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVG 776 L++F G + + S + + +++ K + + A+N A+ ++ D R + + + GL D+FG RV +TP+ E G G A G A G R I E ++ A D IVN AA+ Y SG C + R P G HSQ ++ +PGLKVV P S A+GLL + IRDPNPVV E + LY + +E +D++LP A+V R G DIT+VG Sbjct: 4 LQKF-GEIVGTSRSWKLLSSTIAKRYSSSSNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQAC-PIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVG 246
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.272e-27 Identity = 71/225 (31.56%), Postives = 112/225 (49.78%), Query Frame = 3 Query: 147 SGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---EEVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 S K + + A+N AL + + D + + + T GL +++G RV +TP+ E G G +G A G + + E ++ A D I+N AAK Y S Q + + R G G HS +++ PGLKV++P S A+GLL + IRDP+PVVF E + LY S EV + + LP+ +A++ REG D+T+ + + +A Sbjct: 22 SAKQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISV-PIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKA 245 The following BLAST results are available for this feature:
BLAST of CX043461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043461 ID=CX043461; Name=CX043461; organism=Citrus sinensis; type=EST; length=813bpback to top |