CX043461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.272e-27 Identity = 73/204 (35.78%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 174 AINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPLSEAEVIREGSDITLV 773 AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P S AKGL+ S IRD NPVV E + +Y + E E D+++P+ +A++ R+G+ +T+V Sbjct: 38 AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIV 240
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.661e-27 Identity = 84/244 (34.43%), Postives = 119/244 (48.77%), Query Frame = 3 Query: 54 LRRFVGSLSRRNLSTACANKQLIQQHDGGVGSGKSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPLSEAEVIREGSDITLV 773 LR G L RR TA A Q+ + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y + E PE D+++P+ +A++ R+G+ IT+V Sbjct: 12 LREVSGLLKRRFHWTAPAALQV--------------TVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.170e-27 Identity = 74/204 (36.27%), Postives = 107/204 (52.45%), Query Frame = 3 Query: 174 AINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPE---DDYMLPLSEAEVIREGSDITLV 773 AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y SG + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y + E PE D+++P+ +A++ R+G+ IT+V Sbjct: 38 AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27 Identity = 75/204 (36.76%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 165 LYSAINQALHIAL-ETDPRAYXXXXXXXXXXXXRCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 L+ A+N A+ + D A + T L ++G+ RV +TP+ E VG AIG A G + E +I AF QI N SG ++ + +R P G G HSQ E +F VPGL++V +P AKGLL S IR NP+ F E LY L EVP++DY+LPL +AE++R+G+DIT++ Sbjct: 6 LFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAENSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIP-IVLRGPGGVGKQLGAEHSQRLECYFQSVPGLQIVACSTPYNAKGLLKSAIRSKNPIFFLEHVLLYNLKA-EVPDNDYVLPLEKAEIVRQGNDITIL 207
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.701e-27 Identity = 73/209 (34.93%), Postives = 108/209 (51.67%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPLSEAEVIREGSDITLV 773 L + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ +A++ R+G+ IT+V Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27 Identity = 73/209 (34.93%), Postives = 108/209 (51.67%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE---EVPEDDYMLPLSEAEVIREGSDITLV 773 L + AINQ + LE D + + + + GL ++G R+ +TP+ E G G A+G A G R I E ++ A DQ++N AAK Y S + R P GA HSQ A++ H PGLKVV P + AKGL+ S IRD NPVV E + +Y ++ E E D+++P+ +A++ R+G+ IT+V Sbjct: 33 LTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAG-LQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVV 240
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.533e-24 Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 3 Query: 261 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLV 773 + T L ++G RV + P+ E G AIG A G R I E ++ AF+QI N + +Y SG FN + +R P G HSQ E+ F +PGL++V + AKGLL S I + P++F E LY L VP+++Y LPL +AEV+R GSD+T+V Sbjct: 39 KVTKDLHVKYGDLRVLDAPIAENSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNI-PVVIRGPGGIGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLK-GFVPDEEYYLPLDKAEVVRSGSDVTIV 207 The following BLAST results are available for this feature:
BLAST of CX043461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043461 ID=CX043461; Name=CX043461; organism=Citrus sinensis; type=EST; length=813bpback to top |