DC900219

Overview
NameDC900219
Unique NameDC900219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 82/228 (35.96%), Postives = 126/228 (55.26%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  +   K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +   RL     +  VDP ++P +   ++  C D  P+P AV  V  D  +    DN+YY+N++  KGL   D  L  D  ++  V + A + + F+  FS A+  L       G +GEIR+ C+  N
Sbjct:  107 FDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAV--VDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 83/223 (37.22%), Postives = 122/223 (54.71%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G +HC + V R+    +   NP     +   C +   DP     V ND  TP   DN YY+N+    GL+  DH L  D RTR +V   A +QD FFK+F+ A+  LS      G +GEIR+ C+  N
Sbjct:   97 FDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV-GRNNTGYNPRFAVALKKACANYPKDPTI--SVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.969e-33
Identity = 80/231 (34.63%), Postives = 123/231 (53.25%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L   + +++  V+  A +Q+ FF++F+ ++  +   +PL G KGEIR++C   N
Sbjct:  106 RGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.101e-33
Identity = 83/236 (35.17%), Postives = 127/236 (53.81%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDY----FFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDGR S+A  +   LP  +DS+ V  ++FAA G++   LV L+G H++G + C     RL+        DPA++P  V ++   CP    +  A   V  D G+    D +Y+ N+ + +G++  D  L  D  T+ +V++    + +    F  EF  ++  +S      GT GEIRK+C+  N
Sbjct:   99 GLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQ---NTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDPSTKSFVQRYLGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKICSAFN 330          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.552e-32
Identity = 83/236 (35.17%), Postives = 127/236 (53.81%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N   V  + + CP        DP  + Y+  D G+     ++YY  +L +  ++ VD +L  +  ++   ++ A   + F K F+ A++ +   N L GT GEIR+ C + N
Sbjct:  104 GLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDP--LVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSKEITQEFASGFEDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTN 335          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.552e-32
Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY--------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXS--QDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   ++  +  KC     +   V+    D G+    D  Y++N+   +GL   D +L  +  TR YV++ A    +D FF +F+ ++  +     L G++GEIRK CN+ N
Sbjct:   95 LRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEM---DPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.028e-32
Identity = 79/231 (34.20%), Postives = 122/231 (52.81%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY +      D  L      ++  +CP +  D         D  +    DN+Y++N+++NKGL+  D  L + + ++R  VKK A  Q  FF++F+ ++  +   +PL G+ GEIRK C   N
Sbjct:  103 RGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVL---DIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.028e-32
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +        +P  N++ + ++ RF   G+D   +VAL GSH++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L + + ++R  VKK A  Q+ FF++F+ ++  +   +PL G+ GEIRK C   N
Sbjct:  109 RGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.517e-32
Identity = 77/232 (33.19%), Postives = 121/232 (52.16%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQ-DYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H++G  HC ++  RLY      + DP L+ ++   +  KC            +  D G+    D +Y++ +   +GL   D  L  +  T+ YV K   S    FFK+F  ++  +     L G  GE+RK C + N
Sbjct:  102 LRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPT----DTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.705e-32
Identity = 82/224 (36.61%), Postives = 114/224 (50.89%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRK-SRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  I N++  V+++C  VVSC+DIL L+ RD VV  GGP   +  GRRD    +  E     LP    + S ++  FA   ++   LVAL G H++G  HC     RLYP  DP +N      +   CP A      V    ND  +P V DN YY ++++ +GL   D  L  D RTR  V+  A  Q  FF  F+ A+  + + + L GT+GEIR  C+  N
Sbjct:  120 FVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQV----NDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
The following BLAST results are available for this feature:
BLAST of DC900219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER55_ARATH3.128e-3335.96Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER31_ARATH3.128e-3337.22Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER72_ARATH6.969e-3334.63Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER2_ARAHY9.101e-3335.17Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER61_ARATH1.552e-3235.17Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER1_ORYSJ1.552e-3234.32Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER49_ARATH2.028e-3234.20Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER15_ARATH2.028e-3233.77Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER56_ARATH4.517e-3233.19Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER12_ARATH7.705e-3236.61Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]

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Properties
Property NameValue
Genbank descriptionDC900219 VSS Citrus sinensis cDNA clone VS28258 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900219 ID=DC900219; Name=DC900219; organism=Citrus sinensis; type=EST; length=903bp
TTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAA
AGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGG
TAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAG
GAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTC
CCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCAT
TGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCNCCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCNCCGACAANAGGACAAGACC
TTATGTTAAGAAGATGGCCAANAGTCAAGACTACTTCTTCAAGGAATTTT
CAANAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCNCAGGNACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCNCGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCNTGTTTCTTCTATGAGGAANAAAANAGTGTNAGATGAGCTCC
CAATAANATGGTTTTTCTAGATCGGTTTGTTTCCTGTNANATGTTCGTAT
TACTGCTATTATGNTCCTTANATGGACCGTCCAATGTTTAAGCCTAGGCT
TTC
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