DC900219

Overview
NameDC900219
Unique NameDC900219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.314e-31
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L + + ++R  VKK A  Q+ FF++F+ ++  + + +PL G+ GEIRK C   N
Sbjct:  108 RGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.716e-31
Identity = 85/236 (36.02%), Postives = 125/236 (52.97%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY      +  P +N   +  M  +CP        DP  + Y+  D G+     +++Y  IL NK ++ VD QL  +  T+   K+ +   + F K F+ +++ +   N L  T+GEIRK C   N
Sbjct:  104 GLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDP--LVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.242e-31
Identity = 84/234 (35.90%), Postives = 125/234 (53.42%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMA-XSQDYFFKEFSXAITLLSENNPLXGTK--GEIRKVCNLAN 683
            +R F  I++IK  +E+ CPG VSCADIL  + R   V LGGPY P   GRRD + S A  +E+ +P     ++ +LE F + G++   LV L G+H++G+  C  +  RLY        DP+++  +  ++  +C        A + V  D  TP V DN YY N+  + G++  D +L  D RT P VK  A  S   F ++F+ ++  L     L G    GEIRKVC+ +N
Sbjct:  119 LRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRC------RWASETVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSN 345          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.242e-31
Identity = 79/230 (34.35%), Postives = 121/230 (52.61%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDGR S A      LP   DS++V  ++F+A+G++   LV L+G H++G   C     RL+       DP ++P  +  +  +CP    +      V  D G+    D +YY N+   +G++  D  L  D  TRP V+++   +  F  EF+ ++  +S    + G  GEIR+VC+  N
Sbjct:  103 LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCPQ---NGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.824e-31
Identity = 77/226 (34.07%), Postives = 112/226 (49.56%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +  ++          CP A            D  TP   DN YY+N+++ KGL+  D  L     T   VK    +   F  +F   +  + +  PL G++GEIRK C   N
Sbjct:   99 IRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN--IDSSFAKTRQASCPSASGSGDN-NLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.824e-31
Identity = 81/233 (34.76%), Postives = 126/233 (54.08%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEV-----DPALNPDHVPHM-LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKK-MAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC     RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L  +  T   + + +  S   FF EF+ ++  +   N   G+ G +R+ C++AN
Sbjct:   96 VRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.824e-31
Identity = 75/233 (32.19%), Postives = 122/233 (52.36%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRND-RGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLANK 686
            +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L  +  TR YVK  +  QD FF+ F+  +  L +     G  GEIR  C + N+
Sbjct:   95 LRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVNR 320          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.994e-31
Identity = 78/227 (34.36%), Postives = 120/227 (52.86%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A  +  FF  F+ A+  +SE N   G  GE+R+ C+  N
Sbjct:   98 FDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.994e-31
Identity = 79/226 (34.96%), Postives = 117/226 (51.77%), Query Frame = 3
Query:   15 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLANKL 689
            F  +  IK A+E  CPGVVSCADIL  + RD V  +GGPY  +K GR+DG +S+A  +   +P  N ++  +   F   G     +VAL G+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP   DN Y++N+    GL+  DH L  D  T+P+V   A ++  FF++F+ A+  L          GE+R+ C+  N L
Sbjct:  109 FDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNL 332          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.994e-31
Identity = 80/235 (34.04%), Postives = 120/235 (51.06%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRN-DRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFF---KEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A  LV L G H++G + C  +  RLY      + DP++NP +V  +  KCP     P   +   N D G+ +  D +Y++ +   KGL   D  L  D  T+ YV+  A     F    K+FS ++  L     L G  GEIRK C   N
Sbjct:   96 LKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP-----PTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
The following BLAST results are available for this feature:
BLAST of DC900219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER14_ARATH1.314e-3133.77Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER26_ARATH1.716e-3136.02Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER7_ARATH2.242e-3135.90Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER71_ARATH2.242e-3134.35Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER4_VITVI3.824e-3134.07Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER3_ARATH3.824e-3134.76Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER17_ARATH3.824e-3132.19Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER6_ARATH4.994e-3134.36Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER65_ARATH4.994e-3134.96Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER1_ARATH4.994e-3134.04Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900219 VSS Citrus sinensis cDNA clone VS28258 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900219 ID=DC900219; Name=DC900219; organism=Citrus sinensis; type=EST; length=903bp
TTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAA
AGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGG
TAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAG
GAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTC
CCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCAT
TGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCNCCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCNCCGACAANAGGACAAGACC
TTATGTTAAGAAGATGGCCAANAGTCAAGACTACTTCTTCAAGGAATTTT
CAANAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCNCAGGNACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCNCGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCNTGTTTCTTCTATGAGGAANAAAANAGTGTNAGATGAGCTCC
CAATAANATGGTTTTTCTAGATCGGTTTGTTTCCTGTNANATGTTCGTAT
TACTGCTATTATGNTCCTTANATGGACCGTCCAATGTTTAAGCCTAGGCT
TTC
back to top