DC900219

Overview
NameDC900219
Unique NameDC900219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.211e-30
Identity = 79/230 (34.35%), Postives = 117/230 (50.87%), Query Frame = 3
Query:   15 FRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            F  +   K+AV+    C   VSCADIL L+ R+ VV  GGP  P++ GRRDGR S    ++  LP    +++ +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++N  +V  +   CP  +    A+     D  +P   DN Y++N+   KGL   D  L  D R+R  V   A S+  F + F  AIT L     L G  GEIR+ C+  N
Sbjct:   99 FDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINM---DPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.211e-30
Identity = 78/223 (34.98%), Postives = 116/223 (52.02%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVC 671
            G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   + GT G +R +C
Sbjct:   99 GVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.211e-30
Identity = 78/223 (34.98%), Postives = 116/223 (52.02%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVC 671
            G+  +  I+  K AVER CPGVVSCADIL ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++   +VAL GSH++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   + GT G +R +C
Sbjct:   99 GVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.230e-29
Identity = 76/225 (33.78%), Postives = 114/225 (50.67%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y      ++         +CP    + +       D  TP   DNNY++N++  KGL+  D  L     T   V + + S   F  +F+ A+  + + +PL G  G IRKVC   N
Sbjct:  102 RGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSN-GTDIDAGFASTRRRQCPQ---EGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFNGGSTDNIVSEYSNSARAFSSDFAAAMIKMGDISPLSGQNGIIRKVCGSVN 322          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.607e-29
Identity = 83/237 (35.02%), Postives = 120/237 (50.63%), Query Frame = 3
Query:    3 GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQD-----YFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+    RLY        DP ++P  +  +   CP   P+    + V  D G+P   D ++++N+ D   ++  D +L  D  T   VKK A          F  EF  A+  +S  +      GE+RKVC+  N
Sbjct:   96 GLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP---PNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.607e-29
Identity = 81/234 (34.62%), Postives = 116/234 (49.57%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXR---TRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L        T P V+  A     FF  F  A+  +    PL GT+GEIR  C + N
Sbjct:  103 RGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVN 333          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.098e-29
Identity = 78/232 (33.62%), Postives = 113/232 (48.71%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++   LVAL G+H+ GR  C     RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L       T   V   A +Q  FF+ F+ ++  +   +PL G+ GEIR  C   N
Sbjct:  105 RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.740e-29
Identity = 80/221 (36.20%), Postives = 109/221 (49.32%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVC 671
            R F  + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S        LP    S+  +L  ++   +DA  +VAL G+H++G+  C      +Y   D  +N      +   CP +     A      D  TP V  N+YY+N+L  KGL+  D +L  +  T   V   A S   F   F+ A+  +    PL GT G+IR  C
Sbjct:  102 RAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN--DTNINAAFATSLKANCPMSGGSSLAPL----DTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTC 315          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29
Identity = 79/233 (33.91%), Postives = 119/233 (51.07%), Query Frame = 3
Query:    9 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVXRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--AXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            R F  I+ +K A+ER CP  VSCADIL ++ +  V+  GGP   +  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H+ GR  C+ +  RLY        DP LNP ++  +   CP    +      V  D  TP   DN +Y N+ + KGL+  D +L       T P V   + +   FF  F+ A+  +    PL GT+GEIR+ C + N
Sbjct:   75 RGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCP---RNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVN 304          
BLAST of DC900219 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.674e-29
Identity = 78/226 (34.51%), Postives = 112/226 (49.56%), Query Frame = 3
Query:    6 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVXRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAXDXRTRPYVKKMAXSQDYFFKEFSXAITLLSENNPLXGTKGEIRKVCNLAN 683
            +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y   D  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL     T   V+  A +   F ++F+ A+  +   +PL GT+G+IR+ C+  N
Sbjct:   99 IRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYN--DTNVNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
The following BLAST results are available for this feature:
BLAST of DC900219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER45_ARATH7.211e-3034.35Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER2_ZINEL7.211e-3034.98Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL7.211e-3034.98Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PERX_NICSY1.230e-2933.78Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER25_ARATH1.607e-2935.02Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1B_ARMRU1.607e-2934.62Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER53_ARATH2.098e-2933.62Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER42_MAIZE2.740e-2936.20Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PERE5_ARMRU4.674e-2933.91Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER70_MAIZE4.674e-2934.51Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC900219 VSS Citrus sinensis cDNA clone VS28258 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900219 ID=DC900219; Name=DC900219; organism=Citrus sinensis; type=EST; length=903bp
TTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAA
AGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGG
TAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAG
GAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTC
CCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCAT
TGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCNCCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCNCCGACAANAGGACAAGACC
TTATGTTAAGAAGATGGCCAANAGTCAAGACTACTTCTTCAAGGAATTTT
CAANAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCNCAGGNACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCNCGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCNTGTTTCTTCTATGAGGAANAAAANAGTGTNAGATGAGCTCC
CAATAANATGGTTTTTCTAGATCGGTTTGTTTCCTGTNANATGTTCGTAT
TACTGCTATTATGNTCCTTANATGGACCGTCCAATGTTTAAGCCTAGGCT
TTC
back to top