DC900218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.416e-11 Identity = 36/131 (27.48%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 220 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL ++R ++ S G G EG W+S I Sbjct: 64 IKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYG--EGFKWVSQYI 192 HSP 2 Score: 25.7942 bits (55), Expect = 1.416e-11 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT +L+ LK +V P Sbjct: 26 LGLDNAGKTTLLHMLKDERLVQHQP 50
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.839e-11 Identity = 37/131 (28.24%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 220 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSG--------------EGLYEGLDWLSNNI 570 I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L++D L L+ NK D P A + E+ LGL + + + SG G EG WLS I Sbjct: 64 IKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194 HSP 2 Score: 25.7942 bits (55), Expect = 1.839e-11 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT +L+ LK +V P Sbjct: 26 LGLDNAGKTTLLHMLKDERLVQHQP 50
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 4.029e-11 Identity = 36/126 (28.57%), Postives = 59/126 (46.83%), Query Frame = 1 Query: 217 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSL-----------RQRHWYIXSTCATSGEGLYEGLDWLS 561 +I F +D+GG + R LW Y N+ G++F+VDS D R E+R L +L+ +L +L+ +NK D+ A++ + G+ L QR + + G +G WLS Sbjct: 63 SIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRSDQRPLEVFPCSVINRFGYTDGFKWLS 188 HSP 2 Score: 21.9422 bits (45), Expect = 4.029e-11 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLK 152 VGLD AGK+ +L LK Sbjct: 26 VGLDNAGKSTLLAMLK 41
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 5.235e-11 Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIXSTCAT 522 PT GF+ + ++ ++GG R W Y LIFVVDS D R+ EA+ LH+++ + + L+VFANKQDL A + +I + L L + R ++ T T Sbjct: 49 PTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKMFLFGTYLT 162 HSP 2 Score: 25.0238 bits (53), Expect = 5.235e-11 Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 3 Query: 69 PALCQXKNANSKV-GLDAAGKTXILYKL 149 PA + KN V GLD AGKT +L+ L Sbjct: 11 PAWPEEKNKQILVLGLDGAGKTSVLHSL 38
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.764e-11 Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDL 429 PT GFNV ++ + + F +WD+GG++ R +RHY +IFV DS+D + + E++ E + N+ L+ L+ ANKQDL Sbjct: 58 PTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142 The following BLAST results are available for this feature:
BLAST of DC900218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900218 ID=DC900218; Name=DC900218; organism=Citrus sinensis; type=EST; length=837bpback to top |