DC900218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 199.904 bits (507), Expect = 1.478e-50 Identity = 99/182 (54.40%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRD--RIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 MG K+F +LF+ K+ PTIGFNV TVEYKNI+FTVWDVGGQD IRPLWRHY+QNT LI+V+DS D + RI +A++ELH +L EDELR A LLVFANKQDLP AM+ ++T++LGL L++R WYI TCA SG+GLY+GLDWLS+ I +K Sbjct: 1 MGQGASKIFGKLFSKKEVRILMVGLDAAGKTTILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLSDYIFDK 182
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 2.521e-50 Identity = 93/170 (54.71%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 58 KLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNN 567 K+FS++F K+ PT+GFNV TV YKN+ F VWDVGGQDKIRPLWRHY+ TQGLIFVVD DRDRI EAR ELHR++N+ E+R A++L+FANKQDLP+AM EI +KLGL +R R+WY+ +CA SG+GLYEGL WL++N Sbjct: 3 KMFSKIFGNKEMRILMRGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGLTWLTSN 172
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 6.358e-46 Identity = 75/134 (55.97%), Postives = 102/134 (76.12%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PTIGFNV T+EYKN+S TVWDVGGQ KIRPLW+HY+ + +IFVVDS DR+R+ E ++E+ +L +DEL+ +LVFANKQD+ NAMN AEI + L L+S++ R WY+ A +G+YEG DW++N++ NK Sbjct: 55 PTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188 HSP 2 Score: 32.3426 bits (72), Expect = 6.358e-46 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGK+ +LYKLK +V IP Sbjct: 31 IGLDGAGKSTLLYKLKLGDVVSTIP 55
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 6.425e-46 Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 MG+ F ++FS +F K+ PTIGFNV TV+Y NI F VWD+GGQ IRP WR YF NTQ +I+VVDS+D DRI A++E H +L EDEL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLDWLSN + Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.425e-46 Identity = 93/172 (54.07%), Postives = 111/172 (64.53%), Query Frame = 1 Query: 52 FPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNN 567 F K FSRLF+ K+ PT+GFNV TV YKNI F VWDVGGQDKIRPLWRHYF T+GLIFVVDS D +RI EAR ELHR++++ E+R +LLV ANKQDLP A++ A+ITD L L L+ R W + TCA +G+GL EGL WLS N Sbjct: 9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQN 180
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 182.956 bits (463), Expect = 1.869e-45 Identity = 87/177 (49.15%), Postives = 112/177 (63.28%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 MG+ F ++FS +F K+ PTIGFNV TV+Y NI F VWD+GGQ IRP WR YF NTQ +I+VVDS+D DRI A++E H +L E+EL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLDWLSN + Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTL 177
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.070e-45 Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIGFNV TVEYKN+ FT+WDVGG+ K+RPLW+HY+ NTQ ++FVVDS+ RDRI EA EL ++L E ELR A+LL+FANKQD+ A++ EIT+ L LH L R WYI A SG GLYEGLDWLS + Sbjct: 434 PTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565 HSP 2 Score: 30.8018 bits (68), Expect = 3.070e-45 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT IL+KLK + IP Sbjct: 410 LGLDGAGKTTILFKLKQDEFMQPIP 434
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.070e-45 Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIGFNV TVEYKN+ FT+WDVGG+ K+RPLW+HY+ NTQ ++FVVDS+ RDRI EA EL ++L E ELR A+LL+FANKQD+ A++ EIT+ L LH L R WYI A SG GLYEGLDWLS + Sbjct: 434 PTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565 HSP 2 Score: 30.8018 bits (68), Expect = 3.070e-45 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT IL+KLK + IP Sbjct: 410 LGLDGAGKTTILFKLKQDEFMQPIP 434
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.554e-44 Identity = 81/132 (61.36%), Postives = 99/132 (75.00%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIGFNV TVEYKN+ FT+WDVG + K+RPLW+HY+ NTQ ++FVVDS+ RDRI EA EL ++L E ELR A+LL+FANKQD+ A++ EIT+ L LH L R WYI A SG GLYEGLDWLS + Sbjct: 414 PTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 545 HSP 2 Score: 30.8018 bits (68), Expect = 2.554e-44 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT IL+KLK + IP Sbjct: 390 LGLDGAGKTTILFKLKQDEFMQPIP 414
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.270e-43 Identity = 73/134 (54.48%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PTIGFNV T+ YKN+S TVWDVGGQ KIR LW+HY+ T +IFVVDS DR+R+ E ++E+ +L +DEL+ +LV ANKQD+ NAMN AEI + L L+S++ R WY+ A +G+YEG DW++N++ NK Sbjct: 55 PTIGFNVETIVYKNLSMTVWDVGGQHKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGIQILVLANKQDMNNAMNTAEIVNSLNLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188 HSP 2 Score: 30.8018 bits (68), Expect = 1.270e-43 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGK+ +L+KLK +V IP Sbjct: 31 IGLDGAGKSTLLFKLKLGDVVLTIP 55 The following BLAST results are available for this feature:
BLAST of DC900218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900218 ID=DC900218; Name=DC900218; organism=Citrus sinensis; type=EST; length=837bpback to top |