DC900218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.270e-43 Identity = 74/135 (54.81%), Postives = 101/135 (74.81%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCA-TSGEGLYEGLDWLSNNIANK 579 PTIGFNV T+EYKN+S TVWDVGGQ KIR LW+HY+ T +IFVVDS DR+R+ E ++E+ +L ++EL+ +L+FANKQD+ NAMN +EI D L L+S++ R WY+ A S G+YEG DW++N++ NK Sbjct: 55 PTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRKWYVQPCSAIKSPHGIYEGFDWVANSLNNK 189 HSP 2 Score: 32.3426 bits (72), Expect = 1.270e-43 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGK+ +LYKLK IV +P Sbjct: 31 IGLDGAGKSTLLYKLKLGDIVSTVP 55
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 1.145e-41 Identity = 77/131 (58.78%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIGFNV TV ++ I+ TVWDVGGQ KIR LW++YF NT L+FVVDS+D +RI EA++EL +L E EL + LLVFANKQD+PNA + AE+T L L SL+ R W+I T A SG+GLYEGL W+ + Sbjct: 47 PTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQM 177 HSP 2 Score: 32.3426 bits (72), Expect = 1.145e-41 Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT ILYKLK V IP Sbjct: 23 LGLDGAGKTTILYKLKLNETVNTIP 47
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5) HSP 1 Score: 152.91 bits (385), Expect = 1.030e-39 Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PTIGFNV V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDRI ++DEL ML E+EL A+L+V ANKQD+ M AE+ LGL +L+ R + I T AT GEGL + +DWLSN + ++ Sbjct: 46 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179 HSP 2 Score: 31.5722 bits (70), Expect = 1.030e-39 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT ILY+L+ +V IP Sbjct: 22 LGLDGAGKTTILYRLQVGEVVTTIP 46
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4) HSP 1 Score: 154.451 bits (389), Expect = 2.966e-39 Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWL 558 PTIGFNV T+ YKN+ VWD+GGQ IRP WR Y+ +T +IFVVDS D+DR+ A ELH ML E+EL+ A LLVFANKQD P A++A+E++ +L L L+ R W I ++ A GEG+ EGLDWL Sbjct: 48 PTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWL 174 HSP 2 Score: 28.4906 bits (62), Expect = 2.966e-39 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT ILY+L+ +V P Sbjct: 24 LGLDGAGKTTILYRLQIGEVVTTKP 48
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.451e-38 Identity = 73/134 (54.48%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PTIGFNV VEYKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDR+ +R EL ML EDEL+ AVL V ANKQD+ + E+ LGL +LR R I T A+ GEGL +DWL+N + K Sbjct: 46 PTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179 HSP 2 Score: 31.5722 bits (70), Expect = 1.451e-38 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT ILY+L+ +V IP Sbjct: 22 LGLDGAGKTTILYRLQVGEVVTTIP 46
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.098e-37 Identity = 80/180 (44.44%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 MG F +FS LF ++ PTIGFNV TV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDRI ++ EL ML E+ELR A+L+VFANKQD+ AM ++E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.874e-37 Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 MG F +FS LF ++ PTIGFNV TV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDRI ++ EL ML E+ELR A+L+VFANKQD+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.447e-37 Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 MG F +FS LF ++ PTIGFNV TV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDRI ++ EL ML E+ELR A+L+VFANKQD+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.447e-37 Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 MG F +FS LF ++ PTIGFNV TV YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DRDRI ++ EL ML E+ELR A+L+VFANKQD+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 7.120e-37 Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLH-SLRQRHWYIXSTCATSGEGLYEGLDWLSNN 567 MG + K+ +LF K+ PT+GFNV TV YKN+ F +WDVGGQ ++RPLWRHYF T LIFV+DS+ R+R+ EA++EL+ ++ E E+ VLLV+ANKQDL +AM E++D L L +L+ + W + + A SG+GL EGL W+SNN Sbjct: 1 MGNSISKVLGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLELEKNLKNQPWCVIGSNALSGQGLVEGLSWISNN 177 The following BLAST results are available for this feature:
BLAST of DC900218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900218 ID=DC900218; Name=DC900218; organism=Citrus sinensis; type=EST; length=837bpback to top |