DC900218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.140e-33 Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIG NV + N F +WD+GGQ+ +R W Y+ NT+ +I VVDS DR+RI R+EL++ML ++LR A LL+FANKQD+ M AEI+ L L S++ W+I + CA +GEGL +GL+W+ + + Sbjct: 46 PTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176 HSP 2 Score: 27.335 bits (59), Expect = 6.140e-33 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 VGLD AGKT ILY+ +V P Sbjct: 22 VGLDNAGKTTILYQFSMNEVVHTSP 46
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.140e-33 Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIG NV + N F +WD+GGQ+ +R W Y+ NT+ +I VVDS DR+RI R+EL++ML ++LR A LL+FANKQD+ M AEI+ L L S++ W+I + CA +GEGL +GL+W+ + + Sbjct: 46 PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176 HSP 2 Score: 27.335 bits (59), Expect = 6.140e-33 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 VGLD AGKT ILY+ +V P Sbjct: 22 VGLDNAGKTTILYQFSMNEVVHTSP 46
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.140e-33 Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PTIG NV + N F +WD+GGQ+ +R W Y+ NT+ +I VVDS DR+RI R+EL++ML ++LR A LL+FANKQD+ M AEI+ L L S++ W+I + CA +GEGL +GL+W+ + + Sbjct: 46 PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176 HSP 2 Score: 27.335 bits (59), Expect = 6.140e-33 Identity = 13/25 (52.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 VGLD AGKT ILY+ +V P Sbjct: 22 VGLDNAGKTTILYQFSMNEVVHTSP 46
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 1.064e-32 Identity = 72/177 (40.68%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 MGL F KL+S LF ++ PTIG NV + KN F +WD+GGQ+ +R W Y+ NT+ +I VVDS DR+R+ ++EL+RML ++LR A +L+FANKQD+ M AAEI+ L L S++ W+I S CA +GEGL +GL+W+++ I Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.064e-32 Identity = 72/177 (40.68%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 40 MGLTFPKLFSRLFAXKKXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 MGL F KL+S LF ++ PTIG NV + KN F +WD+GGQ+ +R W Y+ NT+ +I VVDS DR+R+ ++EL+RML ++LR A +L+FANKQD+ M AAEI+ L L S++ W+I S CA +GEGL +GL+W+++ I Sbjct: 1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.356e-32 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PT GFN+ +V+ + VWD+GGQ KIRP WR YF+NT LI+V+DS DR R E EL +L E++L +LVFANKQDL A AAEI + L LH++R R W I S A +GEG+ +G++W+ N+ K Sbjct: 47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180 HSP 2 Score: 21.9422 bits (45), Expect = 1.356e-32 Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT +L +L I P Sbjct: 23 LGLDNAGKTTLLKQLASEDISHITP 47
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.766e-32 Identity = 57/131 (43.51%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNI 570 PT+G N+ Y+NI +WD+GGQD +R W Y+ NTQ +I V+DS DR R+ ++EL +ML + L+ +++L++ANKQDL +AM+ E++ L LHS++ ++I + CA +G+GL GLDWL ++I Sbjct: 50 PTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180 HSP 2 Score: 28.1054 bits (61), Expect = 1.766e-32 Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 VGL+AAGKT LYKL +V P Sbjct: 26 VGLNAAGKTTTLYKLLLDEVVSTTP 50
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.299e-32 Identity = 59/134 (44.03%), Postives = 92/134 (68.66%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PT+GF++ TV +K+ +WDVGGQ +R W++YF++T LI+VVDS+DR+R+++ +EL ++L E+ L A LLV ANK DLP A++ I L LHS++ HW I S CA SG+ L + + WL +++ ++ Sbjct: 46 PTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSR 179 HSP 2 Score: 20.4014 bits (41), Expect = 2.299e-32 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 105 VGLDAAGKTXILYK 146 +GLD AGKT ++ K Sbjct: 22 LGLDNAGKTTLMKK 35
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.300e-32 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PT GFN+ +V+ + VWD+GGQ KIRP WR+YF+NT LI+V+DS DR R E EL +L E++L +L+FANKQDL A A+EI + L LH++R R W I S A +GEG+ +G++W+ N+ K Sbjct: 47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180 HSP 2 Score: 21.9422 bits (45), Expect = 2.300e-32 Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT +L +L I P Sbjct: 23 LGLDNAGKTTLLKQLASEDISHITP 47
BLAST of DC900218 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.995e-32 Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 178 PTIGFNVXTVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRXAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIXSTCATSGEGLYEGLDWLSNNIANK 579 PT GFN+ +V+ + VWD+GGQ KIRP WR+YF+NT LI+V+DS DR R E EL +L+E++L +L+FANKQDL A A+EI + L LH++R R W I S A +G+G+ +G++W+ N+ K Sbjct: 47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAK 180 HSP 2 Score: 21.9422 bits (45), Expect = 2.995e-32 Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 3 Query: 105 VGLDAAGKTXILYKLKPXXIVXXIP 179 +GLD AGKT +L +L I P Sbjct: 23 LGLDNAGKTTLLKQLASEDISHITP 47 The following BLAST results are available for this feature:
BLAST of DC900218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900218 ID=DC900218; Name=DC900218; organism=Citrus sinensis; type=EST; length=837bpback to top |