CX043435

Overview
NameCX043435
Unique NameCX043435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13152 contig Csv1_Contig13152:224..1057. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_SHEON (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shewanella oneidensis GN=cysJ PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 84/218 (38.53%), Postives = 131/218 (60.09%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +H+T ALV E    G+   G  S ++ ++       + +   ++V  + +F+LP +   P+IMIGPGTG+APFR F+QER A    GA+ G S LFFG  + + D++Y+ E   ++++G L+++ VAFSR+   K YVQH++ E+   +W  L  GA+LY+CGDA+ MA+DVH+ L  +  E G L S  AE   + L+   RY +DV+
Sbjct:  401 SSQTEVDTEVHLTVALV-EDEHQGQTRFGGASHFLASA------QEGAEVKVYVEPNKHFRLPENPDTPVIMIGPGTGVAPFRAFMQERVA---QGAK-GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLTRIDVAFSRDQAHKIYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAKDVHQALLAVAVEFGGLSSEAAEEYFETLRSHKRYQKDVY 607          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain K12) GN=cysJ PE=1 SV=4)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 80/218 (36.70%), Postives = 132/218 (60.55%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  392 SSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOLC (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysJ PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 80/218 (36.70%), Postives = 132/218 (60.55%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  392 SSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_ECOHS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O9:H4 (strain HS) GN=cysJ PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 80/218 (36.70%), Postives = 132/218 (60.55%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  392 SSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_ECO24 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cysJ PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.598e-35
Identity = 80/218 (36.70%), Postives = 132/218 (60.55%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D+  A+  +  L++  RY RDV+
Sbjct:  392 SSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTY (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhimurium GN=cysJ PE=3 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.123e-34
Identity = 79/211 (37.44%), Postives = 129/211 (61.14%), Query Frame = 2
Query:   23 SRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  399 SEVHITVGVVRYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAA---EGVE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPB (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysJ PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.123e-34
Identity = 79/211 (37.44%), Postives = 129/211 (61.14%), Query Frame = 2
Query:   23 SRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            S +H+T  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    G E G + LFFG  +   D++Y+ E   +V+ G LS++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA+ MA DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  399 SEVHITVGVVCYDIE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAA---EGVE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGGLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: NDOR1_DANRE (NADPH-dependent diflavin oxidoreductase 1 OS=Danio rerio GN=ndor1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 73/212 (34.43%), Postives = 126/212 (59.43%), Query Frame = 2
Query:   20 PSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            P+RI +  A+V  KT   +  KGLCS+W+ +   ++ S    + P++V++ + K P D + P+IM+GPGTG+APFR  +QER A  +       ++LFFGCR+   D+    E    VQ+G +  L+ AFSR+   K YVQH++ E+   +W++++ + A+ Y+ G+AK M   V   L  + Q++G +  ++A+ M+  ++  GR+  + W
Sbjct:  392 PNRIQILLAVVKYKTMLVKPRKGLCSSWLAS---LDPSKGDVYVPLWVKKGSLKFPQDPESPVIMVGPGTGVAPFRSAIQERVAQGKMA-----NVLFFGCRSESKDFYCGSEWQEKVQAGQMI-LVTAFSRDQEDKVYVQHRVKEQGKLLWDLIAKKNAFFYIAGNAKQMPTSVCDALKAVFQKEGGMSENQAQEMLDGMEKNGRFQSETW 594          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIBS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella boydii serotype 4 (strain Sb227) GN=cysJ PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 80/218 (36.70%), Postives = 131/218 (60.09%), Query Frame = 2
Query:    2 SSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            SS     + +HVT  +V      GR   G  S+++ + +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A  EA    G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA  MA+DV + L  ++ E G +D   A+  +  L++  RY RDV+
Sbjct:  392 SSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEGE-----VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQR-AADEAP---GKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDIEAADEFLSELRVERRYQRDVY 599          
BLAST of CX043435 vs. ExPASy Swiss-Prot
Match: CYSJ_SALPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella paratyphi A GN=cysJ PE=3 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.915e-34
Identity = 79/211 (37.44%), Postives = 130/211 (61.61%), Query Frame = 2
Query:   23 SRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 652
            S +H+T  +V      GR   G  S+++   +  E         +F+  + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A    GAE G + LFFG  +   D++Y+ E   +V+ G L+++ +A+SR+   K YVQ K+ E+ +++W  +++GA++YVCGDA+ MA DV + L  ++ E G++D   A+  +  L++  RY RDV+
Sbjct:  399 SEVHITVGVVRYDIE-GRARAGGASSFLAGRVEEEGE-----VRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAA---DGAE-GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARCMAVDVEKALLEVIAEFGAMDIESADEYLSELRVERRYQRDVY 599          
The following BLAST results are available for this feature:
BLAST of CX043435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
CYSJ_SHEON8.598e-3538.53Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOLI8.598e-3536.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOLC8.598e-3536.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECOHS8.598e-3536.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_ECO248.598e-3536.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTY1.123e-3437.44Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPB1.123e-3437.44Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
NDOR1_DANRE1.915e-3434.43NADPH-dependent diflavin oxidoreductase 1 OS=Danio... [more]
CYSJ_SHIBS1.915e-3436.70Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALPA1.915e-3437.44Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A10-A19-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043435 ID=CX043435; Name=CX043435; organism=Citrus sinensis; type=EST; length=834bp
ATCTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGG
TTTATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACT
TGGATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGC
ACCCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCGAAAG
TGCCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGT
TTCCTACAGGAAAGGTTTGCTCTGCAGGAAGCTGGAGCAGAACTGGGACC
CTCTCTATTATTTTTCGGATGCAGGAACCGTAAGATGGATTACATTTATG
AGGATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATT
GTTGCCTTCTCACGTGAGGGACCCACCAAGGAGTATGTGCAGCATAAAAT
GATGGAGAAGTCTTCGGATATCTGGAACATGCTTTCTGAGGGAGCTTACT
TGTATGTTTGTGGTGATGCCAAAAGCATGGCTAGAGATGTCCACCGAACT
CTGCACACTATTGTTCAAGAGCAGGGATCTCTTGACAGCTCTAAAGCTGA
GAGCATGGTGAAGAATTTGCAAATGACTGGCAGGTATCTGCGTGATGTAT
GGTGACCATCCTTCTGATTCTGAGTCTTCTCACTAGTAAAATAGGAAGGT
GATTGCATAATACATACATAAATATGTTATCTCGGGCCAGCTCATTTGAA
AAGCACTCAACGGAAAGGCTATTTGTGTGGTTCCTGCCTCCCGCACCCCG
AAAAGGCAACTGCGATTCTTTTTTTTTTTTTTTT
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