DC900216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT NQW E Sbjct: 101 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.093e-17 Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND+TP N+WAFE Sbjct: 102 FDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.428e-17 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDFTP N WAFE Sbjct: 88 FQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 178 F+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 97 FELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 178 F+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 97 FELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.209e-16 Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND TP N+WAFE Sbjct: 92 FDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.578e-16 Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND+TP N+WAFE Sbjct: 102 FDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.578e-16 Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FD++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDFTP NQWAFE Sbjct: 93 FDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154 The following BLAST results are available for this feature:
BLAST of DC900216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900216 ID=DC900216; Name=DC900216; organism=Citrus sinensis; type=EST; length=405bpback to top |