DC900216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ND+T NQW FE Sbjct: 91 FDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.279e-15 Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXXNQWAFE 187 F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDFT N WAFE Sbjct: 105 FKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.977e-15 Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 181 F+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP N+WA Sbjct: 99 FEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.078e-15 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 181 +++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP N+WA Sbjct: 132 YEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.078e-15 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDFTP N W FE Sbjct: 129 FDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.614e-14 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 FD+++AANYLNI+ LLDLTC+TV AD++ GKTP+EIR FNI+ND T NQWAF+ Sbjct: 87 FDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 36/61 (59.02%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 184 F +ILAANYLN +GLL QTVAD IK KTPEE+R+ FNI+NDFTP N W F Sbjct: 96 FKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.332e-14 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 2 Query: 8 LILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND+TP N WAFE Sbjct: 108 LILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
BLAST of DC900216 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.023e-12 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 2 Query: 2 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 187 F L AAN+LN K LL L QTVADMIKG TP+++R+ FNI+ND TP N+WAFE Sbjct: 91 FALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152 The following BLAST results are available for this feature:
BLAST of DC900216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900216 ID=DC900216; Name=DC900216; organism=Citrus sinensis; type=EST; length=405bpback to top |