DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_FRAT1 (Uroporphyrinogen decarboxylase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=hemE PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.979e-35 Identity = 79/239 (33.05%), Postives = 133/239 (55.65%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK---HILNLGHGI 705 IKG GPV +PI + ++D+++ D S+ YV A+ +N ++GF G+P+TLA+Y++EG SK F+K++++ ++ P+++H+LL++ Y+ Q GA +V IFD+W L ++ FSL Y++ I VKQ ++ ++ + G E + D V +DW+V + + R R+G +QGN DP L+GSK I + + K +I+NLGHGI Sbjct: 88 IKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAVKTTSSAIN--VPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQ-KINIPIVFFTKGGSNFFEEIKDKSCDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETVRANIEFIQSDKLNNYIVNLGHGI 323
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_FRATN (Uroporphyrinogen decarboxylase OS=Francisella tularensis subsp. novicida (strain U112) GN=hemE PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.890e-35 Identity = 79/239 (33.05%), Postives = 132/239 (55.23%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK---HILNLGHGI 705 IKG GPV +PI + ++D+++ D S+ YV A+ +N ++GF G+P+TLA+Y++EG SK F+K++++ ++ P+++H+LL++ Y+ Q GA V IFD+W L ++ FSL Y++ I VKQ ++ ++ + G E + D V +DW+V + + R R+G +QGN DP L+GSK I + + K +I+NLGHGI Sbjct: 88 IKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAVKTTSSTIN--VPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADITIIYLLEQVKAGASCVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQ-KINIPIVFFTKGGSNFFEEIKDKSCDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETVRANIEFIQSDKLNNYIVNLGHGI 323
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ACIAC (Uroporphyrinogen decarboxylase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hemE PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 6.636e-35 Identity = 90/265 (33.96%), Postives = 141/265 (53.21%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQT---HPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRL-----GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR---------WKHILNLGHGIKVGTPEENVAHFFE 747 +G+GP + +A V ++ D E+ + YV A+T +R ++ ++GF G+P+TLA Y+VEG S + +K L +S+P ++H +L ++A Y+ Q D GAQAV +FDSW L+ F+EFSL Y +++ +K+T D+ I++ G LE + +V+ LDWT ++A R + GP A+QGN+DP LF + I + + + G HI NLGHGI TP E+VA E Sbjct: 95 EGEGPRFARVVRDEAAVAELAVPDMEK-LRYVFDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRILAINADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDVPRIVFTKGGALWLEDMKGLDCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVLFAPPEAIAAQARAVLDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVE 358
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_HELHP (Uroporphyrinogen decarboxylase OS=Helicobacter hepaticus GN=hemE PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.667e-35 Identity = 83/253 (32.81%), Postives = 142/253 (56.13%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFEVAK 756 + G+GP I+ ++V ++E + + YV L+ +R ++ E A++GF G+P+TLA+Y++EG SK ++K K + + +P +L LL + + Y++ Q GA AVQIFDSWA+ L + EFS Y+K I +K +P + ++L+ G G L+++ DV +DW MA + LG +QGN++P L+ K+ + I++ ++ G+ K HI NLGHG+ P EN ++ + Sbjct: 86 LAGEGPKFNRTISNVSDVVNLQE-GAHKRLTYVYDTLSSIRSKLPKEKALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKEPYILKTLLETLSEELKLYLEGQIRAGANAVQIFDSWASALECEVYFEFSWKYMKDIAQYIKGKYPHIPVMLFPKGIAGYLDKID-GCFDVFGVDWGTPMALAKSYLGTKYVLQGNLEPSRLY-DKESMERGIDEILKIMGKEKGHIFNLGHGMLPDLPRENAIALVQMVR 335
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_FRATM (Uroporphyrinogen decarboxylase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=hemE PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.667e-35 Identity = 79/239 (33.05%), Postives = 132/239 (55.23%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK---HILNLGHGI 705 IKG GPV +PI + ++D+++ D S+ YV A+ +N ++GF G+P+TLA+Y++EG SK F+K++++ ++ P+++H+LL++ Y+ Q GA +V IFD+W L ++ FSL Y + I VKQ ++ ++ + G E + D V +DW+V + + R R+G +QGN DP L+GSK I + + K +I+NLGHGI Sbjct: 88 IKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAVKTTSSAIN--VPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYKEYIAKNVKQ-KINIPIVFFTKGGSNFFEEIKDKSCDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETVRANIEFIQSDKLNNYIVNLGHGI 323
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_STACT (Uroporphyrinogen decarboxylase OS=Staphylococcus carnosus (strain TM300) GN=hemE PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.132e-34 Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKA-GRWKHILNLGHGI 705 G GPVI + I T +V+++ + DP+ VPYV + +L EE N ++GFVGAPFTLASY++EGG SK++ K + F AL+ Y Q + GA+ +QIFDSW L+ VDF + P +++++ +K H D+ +IL+ + L+E +DV+ +DW + E G +QGN+DP L D I R++ + + KHI NLGHG+ Sbjct: 92 GIGPVISNTIKTVQDVEKLGQIDPKRDVPYVLDTIKLLTEEKLN-VPLIGFVGAPFTLASYMIEGGPSKNYHFTKAMMFRDEATWFALMDHLVDMSITYASAQIEAGAELIQIFDSWIGALNAVDFNYYIKPSMERLIKGIKAQH-DVPIILFGVNATHLIEEWNNLPIDVLGIDWRTTIKE-TSDSGVAKTIQGNLDPSLLLAPWDVIQPRLDKILDEGMQHGKHIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ACISJ (Uroporphyrinogen decarboxylase OS=Acidovorax sp. (strain JS42) GN=hemE PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.132e-34 Identity = 87/265 (32.83%), Postives = 142/265 (53.58%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQT---HPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRL-----GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR---------WKHILNLGHGIKVGTPEENVAHFFE 747 +G+GP + +A+V + D ++ + YV A+T +R +N ++GF G+P+TLA Y+VEG S + +K L +S+P ++H +L ++A Y+ Q D GAQAV +FDSW L+ F++FSL Y ++++ +K+T D+ I++ G G L+ + +V+ LDWT + + R + GP A+QGN+DP LF + + ++ + G HI NLGHGI TP E+VA E Sbjct: 95 EGEGPRFAKAVRDEADVAALAVPDLDK-LRYVFDAVTSIRRALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAVNADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGCFQQFSLEYTRRVLAQLKRTGVDGQDVPRIVFTKGGGIWLDDMKDIDCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNVLFAPPEAVAAQVRAVLDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVE 358
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RHORT (Uroporphyrinogen decarboxylase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=hemE PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.478e-34 Identity = 88/255 (34.51%), Postives = 139/255 (54.51%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLER-LALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 765 +G+GPV+ DP+ + A+V+ + E + V + + L + + A++GF GAP+T+A+Y++EGGSSK FS K +S+P AL+ ++ Y+ Q D GA+A+QIFD+WA L +F + + + +I + + P + +I + G+G L E + TGVD V LD +V +A + L P VQGN+DP L + + + G I NLGHGI TP ENVA ++ +A R Sbjct: 95 QGEGPVL-DPLTSRADVEALEPGKLRERLGPVFETVRGLASAIPSTTALIGFAGAPWTVATYMLEGGSSKDFSVAKSWIYSRPDDFAALMEVLISATTDYLIAQIDAGAEAIQIFDTWAGVLPETEFHRWVIEPIGRITRALHEQRPGVPVIGFPKGAGVLYETFIRETGVDGVGLDASVPLAWAAKTLQPLCTVQGNMDPLLLVEGGPLMEQAVKRLLDTLGHGPFIFNLGHGIVPQTPPENVARLIDLVRAPR 348
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_RHOP5 (Uroporphyrinogen decarboxylase OS=Rhodopseudomonas palustris (strain BisA53) GN=hemE PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.478e-34 Identity = 82/254 (32.28%), Postives = 141/254 (55.51%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLER-LALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 765 G+GP + DP+++ +V + + + V AL I R E+ E ++GF G+PFT+A+Y+V G + + + +A+ P ++ S +Y+ Q + GA+ +QIFD+WA L P +FE +S+ ++IV+ V++ P +I + G+G +L + TGVD VS+DWT + + R ++ V VQGN+DP L + ++D ++ +HI NLGHGI+ PE +AH ++ K +R Sbjct: 95 GEGPRL-DPLDSPDKVSTLTKAIDLSKLQAVFDALRITRRELPPETTLIGFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKIIDVLVESSIQYLLAQLEAGAEVLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGTKIIGFPRGAGAMLPAFVERTGVDGVSIDWTAEPSFVREKVQSKVVVQGNLDPLVLIAGGAALDEAVDDVLKNFSGGRHIFNLGHGIQ---PETPIAHVEQMLKRVR 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_DIAST (Uroporphyrinogen decarboxylase OS=Diaphorobacter sp. (strain TPSY) GN=hemE PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.478e-34 Identity = 88/265 (33.21%), Postives = 141/265 (53.21%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQT---HPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRL-----GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR---------WKHILNLGHGIKVGTPEENVAHFFE 747 +G+GP + +A+V + D ++ + YV A+T +R +N ++GF G+P+TLA Y+VEG S + +K L +S+P ++H +L ++A Y+ Q D GAQAV +FDSW L+ F++FSL Y ++++ +K+T D+ I++ G G L+ + +V+ LDWT + + R + GP A+QGN+DP LF I ++ + G HI NLGHGI TP E+VA E Sbjct: 95 EGEGPRFAKAVRDEADVAALAVPDLDK-LRYVFDAVTSIRRALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAVNADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGCFQDFSLEYTRRVLAQLKRTGVDGQDVPRIVFTKGGGIWLDDMKDIDCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNVLFAPSAQIVTQVRAVLDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVE 358 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |