DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_CARHZ (Uroporphyrinogen decarboxylase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=hemE PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.998e-56 Identity = 113/250 (45.20%), Postives = 161/250 (64.40%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RWKHILNLGHGIKVGTPEENVAHFFEV 750 + +GPVI +P+ T +V +VR PEE VPYV +A+ ILR E+ + ++GF GAPFTLASY++EGG SK++ + KRL + P+ H LL K S +Y++ Q GAQAVQ+FDSW LSP D+E++ LP+ K + D +K+T + +I +A+ +G +LE +A G DV+ LDW V + + +G D VQGN+DP ALF K+ I ++ + + KAG R HI NLGHGI TP EN + EV Sbjct: 88 RDEGPVIENPVRTIVDVKKVRVITPEEDVPYVLEAIKILRRELAGKVPLIGFSGAPFTLASYIIEGGGSKNYIQCKRLMWEAPEAWHELLGKIAESTVRYLKAQIAAGAQAVQVFDSWVGTLSPEDYEKYVLPHSKYVFDNLKET--GVPVIHFANNAGSMLELVAAAGGDVIGLDWRVSLDRAWQTVGFDRGVQGNLDPVALFAPKEVIRQKVKEILIKAGKRPGHIFNLGHGIHKETPVENAQYLVEV 335
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_MYXXD (Uroporphyrinogen decarboxylase OS=Myxococcus xanthus (strain DK 1622) GN=hemE PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.519e-55 Identity = 110/232 (47.41%), Postives = 151/232 (65.09%), Query Frame = 1 Query: 10 KGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI 705 KGP DP+ + A++D++ DP E +V +A+ R+ +N+ V+GF GAPFTLA+Y+VEGG SK + IKRL F QP++ H L K T ++ Y++ Q + GA VQIFDSW LSP D+E F +PYLK++V +K T + +I++ G L L TG DVV LDWT+ M EGR+ LGPDVAVQGN+DP LF ++ + R+ D +R+AG HI NLGHGI Sbjct: 89 KGPHFPDPVRSAADIDKLGVPDPVEGTGFVAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQPELAHRLFGKLTDTLIPYLKMQVEAGASIVQIFDSWGGALSPWDYERFCIPYLKRMVSELKAT--GVPVIVFGVGMSSHLSLLKSTGADVVGLDWTLPMDEGRKVLGPDVAVQGNLDPLHLFLPREELDGRVKDILRRAGPEGHIFNLGHGI 318
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SERP5 (Uroporphyrinogen decarboxylase OS=Serratia proteamaculans (strain 568) GN=hemE PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.053e-52 Identity = 105/254 (41.34%), Postives = 155/254 (61.02%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFEVAKA 759 G+GP PI + A+VD++ FDPE + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+K+K++ +++P LH LL K S+ Y+ Q GAQ+V +FD+W L+ D+ EFSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ S + I + + G + H+ NLGHGI P EN F E A Sbjct: 94 GEGPRFSSPITSRADVDKLPAFDPEVELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLYASPERIGQEVETILAGFGHGEGHVFNLGHGIHPDVPPENAGAFVEAVHA 347
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBCH (Uroporphyrinogen decarboxylase OS=Vibrio cholerae GN=hemE PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 104/251 (41.43%), Postives = 157/251 (62.55%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GPV PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+P VLHALL K S+ Y+ Q GAQAV +FD+W L+P D+++FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ I + + G+ H+ NLGHGI + P EN F E Sbjct: 94 GEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBC3 (Uroporphyrinogen decarboxylase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=hemE PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.738e-51 Identity = 104/251 (41.43%), Postives = 157/251 (62.55%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GPV PI A+VD++ DPE + YV A+ +R+++ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +S+P VLHALL K S+ Y+ Q GAQAV +FD+W L+P D+++FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ I + + G+ H+ NLGHGI + P EN F E Sbjct: 94 GEGPVFERPITCKADVDKIGIPDPEGELQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP7 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hemE PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.058e-51 Identity = 105/250 (42.00%), Postives = 155/250 (62.00%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP--DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD + DPE + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K S+ Y+ Q GAQAV +FD+W L+ +++EFSL Y+ +IVD + + + + + L+ G G LE +A TG D V LDWTVD+A+ RRR+G VA+QGN+DP L+ + I + + G+ H+ NLGHGI PE++ F + Sbjct: 94 GEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAQPERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVD 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ACTP2 (Uroporphyrinogen decarboxylase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hemE PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.058e-51 Identity = 105/250 (42.00%), Postives = 155/250 (62.00%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP--DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP PI A+VD + DPE + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+KIK++ ++ PK+LHALL K S+ Y+ Q GAQAV +FD+W L+ +++EFSL Y+ +IVD + + + + + L+ G G LE +A TG D V LDWTVD+A+ RRR+G VA+QGN+DP L+ + I + + G+ H+ NLGHGI PE++ F + Sbjct: 94 GEGPKFARPIENKAQVDNLPIPDPESELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAQPERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVD 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVY (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus (strain YJ016) GN=hemE PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.605e-51 Identity = 100/251 (39.84%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GP+ +PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ S D I + + G H+ NLGHGI + P EN F E Sbjct: 94 GEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSMLYASHDRIREEVASILEGFGHGGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VIBVU (Uroporphyrinogen decarboxylase OS=Vibrio vulnificus GN=hemE PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.605e-51 Identity = 100/251 (39.84%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFE 747 G+GP+ +PI A+V+++ DPE + YV A+ +R+++N + ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K S+ +Y+ Q GAQ+V +FD+W L+P D+ FSL Y+ +IVD + + + + + L+ G LE++A TG D V LDWT+++A+ + R+G VA+QGN+DP L+ S D I + + G H+ NLGHGI + P EN F E Sbjct: 94 GEGPIFDNPITCKADVEKIGVPDPEGELQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSMLYASHDRIREEVASILEGFGHGGTGHVFNLGHGIHLDVPPENAGVFVE 344
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PSEA6 (Uroporphyrinogen decarboxylase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=hemE PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 8.627e-51 Identity = 101/251 (40.24%), Postives = 154/251 (61.35%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD--TVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 +G+GP PI + A++ + DPE+ + YV A+ +R+ + E ++GF G+P+TLA+Y++EGGSSK F+KIK++AFS P+ LH LL K S+ Y+ Q D GAQ+V +FD+W LSP D+++FSL Y+ +IVD T + + + L+ +G LE +A TG D V LDWT+D+ + R+G VA+QGN+DP L+ + + I + + G H+ NLGHGI + P EN F + Sbjct: 93 QGEGPKFSKPITSMADIQNLPAPDPEQELQYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPQALHLLLDKLADSVILYLNAQIDAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTRENDGRKVPVTLFTKNAGMWLESIAATGCDGVGLDWTIDIDNAKARVGDKVALQGNMDPSMLYAAPERIEQEVQKILAGFGEGPGHVFNLGHGIHLDVPPENAKVFVD 343 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |