DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACC1 (Uroporphyrinogen decarboxylase OS=Bacillus cereus (strain ATCC 10987) GN=hemE PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.618e-34 Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI +PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + GA+AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDNPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACAN (Uroporphyrinogen decarboxylase OS=Bacillus anthracis GN=hemE PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.618e-34 Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI +PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + GA+AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDNPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACAH (Uroporphyrinogen decarboxylase OS=Bacillus thuringiensis (strain Al Hakam) GN=hemE PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 5.618e-34 Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI +PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + GA+AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDNPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACC2 (Uroporphyrinogen decarboxylase OS=Bacillus cereus (strain G9842) GN=hemE PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.337e-34 Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI +PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + GA+AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDNPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKEPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_VARPS (Uroporphyrinogen decarboxylase OS=Variovorax paradoxus (strain S110) GN=hemE PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.582e-34 Identity = 87/268 (32.46%), Postives = 140/268 (52.24%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDV-----AVQGNVDPGALFGSKDFITNRINDTVRKAGR---------WKHILNLGHGIKVGTPEENVAHFFEVAKA 759 G+GP P+ +A V + E + YV A+ +R+ ++ ++GF G+P+TLA Y+VEG S + +K + +S+P ++H LL S+A Y+ Q D GAQAV +FDSW L+ F+EFSL Y +++ +++ D + I++ G G LE + +V+ +DWTV+++ RR +G A+QGN+DP LF I + ++ G+ HI NLGHGI TP ++VA + A Sbjct: 96 GEGPRFARPVQGEAAVAAL-EVPDMAKLRYVFDAVASIRKALDGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRLLAVNADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLQRNGADGQPVPRIVFTKGGGLWLEAMRELDCEVLGVDWTVNLSAARRLVGEGTDAKAKALQGNIDPNVLFAPPAQIEAEVAKVLQAFGQPHADAAAKGPTHIFNLGHGISQFTPPDHVAALVQAVHA 362
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACC0 (Uroporphyrinogen decarboxylase OS=Bacillus cereus (strain AH820) GN=hemE PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.582e-34 Identity = 82/234 (35.04%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI +PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + GA+AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDNPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAPHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_POLNA (Uroporphyrinogen decarboxylase OS=Polaromonas naphthalenivorans (strain CJ2) GN=hemE PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.252e-33 Identity = 83/257 (32.30%), Postives = 137/257 (53.31%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSL--ILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPD----VAVQGNVDPGALFGSKDFITNRINDTVRKAGR---------WKHILNLGHGIKVGTPEENV 732 G+GP P+ +A V+++ E + YV A+T +R+ + ++GF G+P+TLA Y+VEG S + +K + + +P ++H +L ++A Y+ Q + GAQAV IFDSW L+ F FSL Y +++ +K+ H +++ +++ G G LE + +V+ LDWTV++A+ R +G + A+QGN+DP LF + I + + G I NLGHGI TP E+V Sbjct: 95 GEGPRFATPVRDEAAVNKL-EVPDMNKLRYVFDAVTSIRKALGGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTMLYQRPDLMHKMLAINADAVALYLNAQIEAGAQAVMIFDSWGGVLADAAFHTFSLAYTARVLSQLKREHKGVTIPRLVFTKGGGQWLESMKQLDCEVLGLDWTVNLAKARALVGENGPNAKALQGNLDPNVLFANPAQIEAEVAAVLNSFGAPHTDLTQTGPTQIFNLGHGISQHTPPESV 350
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_GLUOX (Uroporphyrinogen decarboxylase OS=Gluconobacter oxydans GN=hemE PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.135e-33 Identity = 87/259 (33.59%), Postives = 148/259 (57.14%), Query Frame = 1 Query: 1 IKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLA-LTGVDVVSLDWTVD---MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFEVAKAI 762 I G+GPV+ I ++A++ ++ +++V V + L+ L +E+ + +LGF G+PFT++ Y+VEGG S+ F++ +R+ + P + L+ T+S A+ + Q + GA+AV +FDSWA L P F + + +QIV+ ++ HP +I + G ++ A TGV+ ++LD D ++E + P + +QGN+DP LF + + R +R A R K H+ NLGHG+ TP ENVA E +A+ Sbjct: 97 IDGRGPVL-GAIRSEADLARLDPKRVQDAVAPVRETLSRLTKELPDVTTLLGFAGSPFTVSCYMVEGGGSRDFAETRRMMQTNPALFDRLIDTLTSSTAEMLCGQIEAGAEAVMLFDSWAGILPPSAFRRYVIEPTRQIVEYIRARHPKTPIIGFPRLGGIMVREYAQKTGVNTLALDTVADPAQISELVSEVRPGLTLQGNMDPMILFSGGETMI-REAQAIRDAMRGKPHVFNLGHGVMQHTPPENVAALVEAVRAV 353
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_BACWK (Uroporphyrinogen decarboxylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=hemE PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.756e-33 Identity = 81/234 (34.62%), Postives = 132/234 (56.41%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGI 705 G GPVI PI + +V+++ E +PE+ VPY+ + +L E+ + ++GF GAPFTLASY++EGG S+++ K +++PK AL+ K + Y++ Q + G +AVQIFDSW ++ D+ F P +++I V+ + +I++ G+ L+ +DVV LDW + + E R R G AVQGN+DP L I + + + + +I NLGHG+ Sbjct: 93 GIGPVIDSPIRSLQDVEKLGEINPEDDVPYILDTIRLLTTEML-DVPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDLPLDVVGLDWRLPIEEARAR-GVHRAVQGNMDPSFLLAPWPVIEEHVKGILDQGMKQPGYIFNLGHGV 322
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_MYCTU (Uroporphyrinogen decarboxylase OS=Mycobacterium tuberculosis GN=hemE PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.059e-32 Identity = 82/245 (33.47%), Postives = 133/245 (54.29%), Query Frame = 1 Query: 13 GPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERL--ALTGVD------VVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFG---SKDFITNRINDTVRK---AGRWKHILNLGHGI 705 GPVI DP+ T A+V ++ DP+ P + A ++ E + ++GF GAPFTLASY+VEGG S+H + +K + ++P HAL+ K T ++ Q D G A+Q+FDSWA LSP+D+ ++ LP+ ++ + + + + + G+ LL + A+T + VV +DW + + R+ P A+QGN+DP + + + + D R+ AG HI NLGHG+ Sbjct: 98 GPVIADPVRTAADVAAMKPLDPQAIQPVLVAASLLVAEL--GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE--HGVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGV 338 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |