DC900215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECOBW (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain K12 / BW2952) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO8A (Uroporphyrinogen decarboxylase OS=Escherichia coli O8 (strain IAI1) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO55 (Uroporphyrinogen decarboxylase OS=Escherichia coli (strain 55989 / EAEC) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLVRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_ECO24 (Uroporphyrinogen decarboxylase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=hemE PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.734e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SODGM (Uroporphyrinogen decarboxylase OS=Sodalis glossinidius (strain morsitans) GN=hemE PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 100/249 (40.16%), Postives = 152/249 (61.04%), Query Frame = 1 Query: 4 KGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTV--KQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHF 741 +G+GP PI +V+Q+ DPE+ + YV A+ +R+ + ++GF G+P+TLA+Y+VEGGSSK F+KIK++ +++P+ LH LL K S+ Y+ Q GAQAV +FD+W L+ D+ EFS+ Y+ +IVD + +Q + + L+ G G LE +A TG D + LDW+ D+A+ RRR+G VA+QGN+DP L+GS I + + G + H+ NLGHGI P + HF Sbjct: 93 QGEGPRFARPIQHRRDVEQLPIPDPEQELGYVMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPETLHLLLDKLADSVVLYLNGQIRAGAQAVMLFDTWGGALTGADYREFSMHYMHKIVDGLLREQDGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWSTDIADARRRVGDKVALQGNMDPSVLYGSPARIEREVATILDAFGPGEGHVFNLGHGIHQDVPPAHAGHF 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_PELCD (Uroporphyrinogen decarboxylase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hemE PE=3 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 6.182e-49 Identity = 98/241 (40.66%), Postives = 146/241 (60.58%), Query Frame = 1 Query: 16 PVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTV-RKAGRWKHILNLGHGIKVGTPEENVA 735 PV+ P+ T A+V+ +R PE+ VP+V + + +LR E++ ++GF GAPFTLA Y+VEG S+HF +KRL + P+ L+ K T + Y++ QA+ GAQA+Q+FDSW LSP D++ + LPY ++++ + + LI + G+G +L+ +A+ G VV LDW + R LG +AVQGN+DP L G++D I + + AGR HI NLGHGI P EN A Sbjct: 93 PVLEPPVRTAADVEALRVLQPEQDVPFVLETIRLLRRELDGRVPLIGFGGAPFTLACYMVEGAGSRHFLALKRLMYQAPETYARLMDKITDTSIVYLRAQAEAGAQALQVFDSWGGILSPADYQRYVLPYSRRLLSALGDF--GIPLIHFVKGAGAMLDLVAMAGGQVVGLDWCTSLNRARDILGNGMAVQGNLDPSVLLGAQDIIEREVRRILDENAGRPGHIFNLGHGILPEVPPENAA 331
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHIDS (Uroporphyrinogen decarboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=hemE PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.075e-49 Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD--LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFE 747 G+GP P+ A+VD++ DPE+ + YV A+ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F+ IK++ ++ P+ LHALL K S+ Y+ Q GAQAV IFD+W L+ D+++FSL Y+ +IVD + + + + + L+ G G LE +A TG D + LDWT D+A+ RRR+G VA+QGN+DP L+ I + + G + H+ NLGHGI P E+ F E Sbjct: 94 GEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPLEHAGVFVE 343
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHEON (Uroporphyrinogen decarboxylase OS=Shewanella oneidensis GN=hemE PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.075e-49 Identity = 103/254 (40.55%), Postives = 152/254 (59.84%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQ--THPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFEVAKA 759 G+GP P +T + ++ DPE+ + YV KA++ +R E+N + ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P LH LL K S+ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + + + L+ G G LE +A TG D + LDWTVD+A+ RRR+G VA+QGN+DP L+ I + + G H+ NLGHGI E+ F + A Sbjct: 94 GEGPRFERPTDTIDAIKKLSIPDPEDELGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAMAETGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAPIPRIEEEVGQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHA 347
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHEWM (Uroporphyrinogen decarboxylase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=hemE PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.055e-48 Identity = 103/249 (41.37%), Postives = 152/249 (61.04%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHF 741 G+GP P +T + ++ DPE+ + YV +A++ +R E+ E ++GF G+P+TLA+Y+VEGGSSK F KIK++A+ +P LH LL K S+ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + H D + + L+ G G LE +A TG D + LDWTVD+ + RRR+G VA+QGN+DP L+ S + I ++ + G H+ NLGHGI E+ F Sbjct: 94 GEGPRFQRPTDTIDAIKKLSIPDPEDELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHMLLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-HADGRQVPVTLFTKGGGLWLESMAETGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYASPERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGAF 341
BLAST of DC900215 vs. ExPASy Swiss-Prot
Match: DCUP_SHESR (Uroporphyrinogen decarboxylase OS=Shewanella sp. (strain MR-7) GN=hemE PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.055e-48 Identity = 103/254 (40.55%), Postives = 152/254 (59.84%), Query Frame = 1 Query: 7 GKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQ--THPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK-HILNLGHGIKVGTPEENVAHFFEVAKA 759 G+GP P +T + ++ DPE+ + YV KA++ +R E+N + ++GF G+P+TLA+Y+VEGGSSK F KIK++A+++P LH LL K S+ Y+ Q NGAQ++ IFDSW LS + EFSL Y+++IVD + + + + L+ G G LE +A TG D + LDWTVD+A+ RRR+G VA+QGN+DP L+ I + + G H+ NLGHGI E+ F + A Sbjct: 94 GEGPRFERPTDTIDAIKKLAVPDPEDDLGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAMAETGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAPIPRIEEEVAQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHA 347 The following BLAST results are available for this feature:
BLAST of DC900215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900215 ID=DC900215; Name=DC900215; organism=Citrus sinensis; type=EST; length=840bpback to top |