CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEP1 (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R   VDP  V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I  G  DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 75/217 (34.56%), Postives = 107/217 (49.31%), Query Frame = 2
Query:  134 IVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            IV   RTPMG   G    +  A  L +  ++  L R   VDP+ + ++++G V      G   AR AAL AGIP+SV   TVN++C S ++A+  A+++I  G  D  + GG+E M + P        G+   H  L   + +          SMG  AE  A  H I+RE QD+FA  S +R  AA   G F  EI+ +E  A  G    +V+ DE
Sbjct:    6 IVDCIRTPMGRSKGGVFKNKRAEDLSAHLMKGLLDRNPAVDPASIDDIYWGCVQQTLEQGFNVARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGAGDTYLIGGVEHMGHVP-----MTHGNDF-HPGLATSIAQAA-------GSMGLTAEYLATLHGISREQQDEFAYRSHQRAQAATVEGRFRREILAMEGHAADGS-LILVEDDE 208          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 71/212 (33.49%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R + +DP  V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I  G  DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F V S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKIDPKEVEDVIWGCVNQTMEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.784e-18
Identity = 71/212 (33.49%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R + VDP  V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I  G  DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18
Identity = 71/212 (33.49%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R N VDP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I     DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18
Identity = 71/212 (33.49%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R N VDP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I     DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.942e-18
Identity = 65/204 (31.86%), Postives = 105/204 (51.47%), Query Frame = 2
Query:  125 DVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +V IV   RTPMG    G   ++ A  L +  ++  + R   +DP+ ++++++G V      G   AR A+L AGIP++V  TTVN++C S ++A+  A+++I +G  +  + GG+E M + P        G    H  +   + K           MG  AE+    H I+R+ QD+FA  S +R  AA   G F  EI+P+E
Sbjct:    3 NVVIVDCIRTPMGRSKAGAFRNVRAEDLSAHLMKGLISRNPQLDPNSIEDIYWGCVQQTLEQGFNVARNASLLAGIPHTVAATTVNRLCGSSMQALHDATRAIMVGDAETCIIGGVEHMGHVP-----MNHGVDF-HPGMSKSVAKAA-------GMMGLTAEMLGRMHGISRQMQDEFAARSHQRAHAATIEGRFKNEILPIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.455e-18
Identity = 70/212 (33.02%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R N VDP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I     DV + GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFIIGGVEHM----------------GHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.430e-18
Identity = 71/202 (35.15%), Postives = 100/202 (49.50%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPV 724
            V IV   RTPMG   G     + A  L +  + + L R  +VDP+ + ++++G V      G   AR AAL A IP+SV  TTVN++C S ++A+  A+++I +G     + GG+E M + P             + +   GM             MG  AE+ A  H I+RE QD FA  S +R  AA  AG FA EIV V
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLSRNPSVDPATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPATTVNRLCGSSMQALHDAARAIMVGDARTCLIGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDRFAARSHQRAAAATQAGHFAAEIVAV 192          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            ++V IV   RTPMG   G       A  L +  ++  L R   V+PS ++++++G V      G   AR AAL AG+P  +   TVN++C S ++A+   +++I  G  ++ + GG+E M + P             H +   GM             MG  AE+  + H I+RE QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE
Sbjct:    2 KNVVIVDCLRTPMGRSKGGAFRHTRAEDLSAHLMKGILARNPQVNPSEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGARAIMTGDAEICLIGGVEHMGHVPMNHGVDFHPGMSKHVAKAAGM-------------MGLTAEMLGKLHGISREQQDEFAARSHARAHAATMEGRFKNEILPTEGHAADGTLFTL-DHDE 208          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_PSEP12.897e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas putida (str... [more]
FADA_PSEHT2.897e-1834.563-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADA_PSEE42.897e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas entomophila... [more]
FADA_PSEOL3.784e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans ... [more]
FADA_PSESM4.942e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSE144.942e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PHOPR4.942e-1831.863-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADA_PSEU26.455e-1833.023-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_ERWT98.430e-1835.153-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADA_VIBVU1.878e-1732.133-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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