CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.076e-16
Identity = 67/201 (33.33%), Postives = 99/201 (49.25%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEI 715
            +D+ IV   RTPMG    G      A  L +  ++  L+R   VDP  ++++++G V      G   AR +AL AGIP+ V   TVN++C S ++A+  A+++I  G  D+ +AGG+E M + P        G    H  +   + K          SMG  AEL + +  ITRE QD+F   S  +   A   G FA EI
Sbjct:    2 KDIVIVDCIRTPMGRSKNGVFRHTRAEDLSAALMKGLLERNPEVDPEELEDIYWGCVQQTLEQGFNIARNSALIAGIPHKVAGVTVNRLCGSSMQALHDATRAIMNGDGDIFMAGGVEHMGHVPM-----THGIDF-HPGMNKSVAKAS-------GSMGMTAELLSRKFGITREQQDEFGARSHRKAHEATVEGRFAKEI 189          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.712e-16
Identity = 71/208 (34.13%), Postives = 102/208 (49.04%), Query Frame = 2
Query:  125 DVCIVGVARTPM-----GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPV 724
            D+ IV   RT +     GGF  TL       L +  ++A ++R ++DPS V ++  G V++    +A   R AA  AG P+SV   TVN+ C+SGL+A+   + SI+ G  D+ +  G+ESMS           G   G +       K        DC   MG  +E  AE+  +TRE QD  AV S +R  AA  +G    EI+PV
Sbjct:   50 DIVIVAAYRTAICKARRGGFKDTLPD----DLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMST-----DHIPGGGFHGSNPRAQDFPK------ARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLKDEIIPV 242          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.712e-16
Identity = 67/221 (30.32%), Postives = 108/221 (48.87%), Query Frame = 2
Query:  125 DVCIVGVARTPM-GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV-----SAGRGKPSTI 760
            DV IV   RT +     G+       +L +  + A +++ NV+PS V ++  G VL     +A   R AA  AG P +V   TVN+ C+SGL+A+   + +I+ G  D+ +  G+ESM+  P+           G    V+  +K   ++  ++C   MG  +E  A + +++RE QD  AV S  +  +A  +G F  EI PV+        G  KP T+
Sbjct:   43 DVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPR-----------GWKGSVNPNVKK--FEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPVKTKIVDPKTGDEKPITV 250          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.542e-16
Identity = 68/202 (33.66%), Postives = 103/202 (50.99%), Query Frame = 2
Query:  125 DVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            +V IV   RTPMG   G     + A  L +  + A L R  ++D + + ++++G V      G   AR A+L A IP+SV   TVN++C S ++A+  A+++I +G   V + GG+E M + P        G    H  L   + K           MG  AE+ A+ H+I+R+ QD+FA  S +R  AA  AG F  EI+P
Sbjct:    3 NVVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRAVLSRNPSLDAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARAIMVGDAHVSLIGGVEHMGHVPM-----NHGVDF-HPGLSRSVAKAA-------GMMGLTAEMLAKMHNISRQMQDEFAARSHQRAHAATLAGYFKNEIIP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16
Identity = 65/220 (29.55%), Postives = 106/220 (48.18%), Query Frame = 2
Query:  116 KPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR----ANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYL-------AEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAG 739
            +P DV IV   R+ +G GF G    ++   L    +   + R       D +L++EV  GNVL+   G    R A L +GIP S     +N+ C+SGL A+   +  I++G  D+ +A G+ESM+N  K +       +E  + +R     L+                MG   E  A    I+R++QD+FA  S+++   A++ G F  EI+P+++  G
Sbjct:   32 RPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLI---------------PMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG 236          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16
Identity = 66/211 (31.28%), Postives = 100/211 (47.39%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG 745
            R+V +V   RTPMG   G       A  L +  ++  L R   V+PS ++++++G V      G   AR AAL AG+P  +   TVN++C S ++A+   +++I  G  ++ + GG+E M + P             + +   GM             MG  AE+  + H I+RE QD+FA  S  R  AA   G F  EI+P E  A  G
Sbjct:    6 RNVVVVDCLRTPMGRSKGGAFRHTRAEDLSAHLMKGILARNPQVNPSEIEDIYWGCVQQTLEQGFNIARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGTRAIMTGDAEICLIGGVEHMGHVPMNHGVDFHPGMSKNVAKAAGM-------------MGLTAEMLGKLHGISREQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADG 203          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.041e-16
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALIARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDTFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.890e-16
Identity = 71/219 (32.42%), Postives = 105/219 (47.95%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            V IV   RTPMG   G       A  L +  ++  L R   V+P  ++++++G V      G   AR AAL AG+P  +   TVN++C S ++A+  A+++I +G  ++ + GG+E M + P        G    H  L   + K           MG  AE+  + H I+R+ QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE
Sbjct:    4 VVIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHVP-----MTHGVDF-HPGLSKNVAKAA-------GMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDE 208          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.890e-16
Identity = 71/219 (32.42%), Postives = 105/219 (47.95%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            V IV   RTPMG   G       A  L +  ++  L R   V+P  ++++++G V      G   AR AAL AG+P  +   TVN++C S ++A+  A+++I +G  ++ + GG+E M + P        G    H  L   + K           MG  AE+  + H I+R+ QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE
Sbjct:    4 VVIVDCLRTPMGRSKGGAFRHQRAEDLSAHLMKGILARNPQVNPKEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDAARAIMVGDAEICLVGGVEHMGHVP-----MTHGVDF-HPGLSKNVAKAA-------GMMGLTAEMLGKLHGISRQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDE 208          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/201 (33.33%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G     + A  L +  + + L R  +++ S + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P             + +   GM             MG  AE+ A  H I+RE QD FA  S  R  AA  +GAF  EI+P
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRHVRAEDLSAHLMRSLLSRNPSLEASAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPANTVNRLCGSSMQALHDAARMIMTGDAGVCLIGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARLHGISREMQDQFAARSHARAWAATQSGAFKAEIIP 191          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_IDILO2.076e-1633.333-ketoacyl-CoA thiolase OS=Idiomarina loihiensis G... [more]
THIK5_ARATH2.712e-1634.133-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIK1_ARATH2.712e-1630.323-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
FADA_SERP53.542e-1633.663-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
THIK_YEAST4.626e-1629.553-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
FADA_VIBPA4.626e-1631.283-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADA_ACIBT6.041e-1631.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_VIBCH7.890e-1632.423-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA... [more]
FADA_VIBC37.890e-1632.423-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADA_KLEP71.030e-1533.333-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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