CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 68/201 (33.83%), Postives = 96/201 (47.76%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G     + A  L +  + + L R   ++ S + ++++G V      G   AR AAL A IP+SV   TVN++C S ++A+  A++ I  G   V + GG+E M + P        G    H  L   + K           MG  AE+ +  H I+RE QD FA  S +R  AA  AG F  EI+P
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNPQLEASAIDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDASVCLVGGVEHMGHVP-----MNHGVDF-HPGLSRNVAKAA-------GMMGLTAEMLSRMHGISREMQDAFAARSHQRAWAATQAGHFKQEIIP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L AG+P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + ITRE QD F V S  R  AA   G F  EI+ VE
Sbjct:    3 TLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.346e-15
Identity = 65/224 (29.02%), Postives = 101/224 (45.09%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCS---------MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGK 748
            ++ P+DV IV   RT MG    G   ++ A  + +  + A +KR + D + V+++ +G V  +   G    R   L A IP +    TVN++C S ++A+  A+  I     DV + GG+E M                GH  ++ G+      D+  + S         MG  AE+    + ITRE QD+F   S  R  AA  AG F  EI+ +E     G+
Sbjct:    3 TLSPKDVVIVDGVRTAMGKSKNGMFRNVRADSMSAELVRALVKRNDFDTNEVEDIIWGCVNQTLEQGMNIGRNIGLLADIPKTAGGQTVNRLCGSSMQALHTAAAQIMTNQGDVFIIGGVEHM----------------GHVGMMHGI------DINPEASKHYAKASNMMGLTAEMLGRMNGITREQQDEFGYESHRRAWAATQAGRFDNEIIGIEGHDAEGR 204          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.758e-15
Identity = 66/217 (30.41%), Postives = 100/217 (46.08%), Query Frame = 2
Query:  113 IKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGK 748
            + P+DV IV   R+ MG    G    + A  + +  + A ++R + DP  V+++ +G V  +   G    R   L AGIP +    TVN++C S ++A+  A+  I  G  DV + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    ++ITRE QD F + S  R  AA   G F  EI+ +E     G+
Sbjct:    4 LSPKDVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTVNRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDAAGR 204          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15
Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 2
Query:  113 IKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            + P+DV IV   R+ MG    G    + A  + +  + A ++R + DP  V+++ +G V  +   G    R   L AGIP +    T+N++C S ++A+  A+  I  G  DV + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    ++ITRE QD F + S  R  AA   G F  EI+ +E
Sbjct:    4 LSPKDVVIVDGVRSAMGKTKNGMFRHVRADSMSAELVRALVERNDFDPRDVEDIIWGCVNQTLEQGLNIGRNIGLLAGIPKTAGGQTINRLCGSSMQALHTAAAQIMTGQGDVFIIGGVEHM----------------GHVGMMHGVDLNPEASKHYAKASNMMGLTAEMLGRMNNITREEQDAFGLESHRRAWAATTEGRFDNEIIGIE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15
Identity = 64/201 (31.84%), Postives = 102/201 (50.75%), Query Frame = 2
Query:  125 DVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            +V I+   RTPMG   G     + A  L +  + A + R   ++ + + ++++G V      G   AR A+L A IP+SV   TVN++C S ++A+   +++I +G   + + GG+E M + P           + H   VD     G         MG  AE+ A+ H+I+R++QD+FA  S +R  AA  AG FA EIV
Sbjct:    3 NVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQTLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEHMGHVP-----------MNHG--VDFHPGMGRTVAKAAGMMGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAATQAGHFAKEIV 190          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_ENTS81.030e-1533.833-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]
FADA_ACIBY1.030e-1531.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBS1.030e-1531.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBC1.030e-1531.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB51.030e-1531.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB31.030e-1531.753-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_PSYWF1.346e-1529.023-ketoacyl-CoA thiolase OS=Psychrobacter sp. (stra... [more]
FADA_PSYA21.758e-1530.413-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]
FADA_PSYCK2.998e-1530.483-ketoacyl-CoA thiolase OS=Psychrobacter cryohalol... [more]
FADA_YERPS5.114e-1531.843-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
back to top