CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.315e-14
Identity = 66/211 (31.28%), Postives = 95/211 (45.02%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            ++ PRDV IV   R+ MG    G   ++ A  L +  + A + R   D + V+++ +G V  +   G    R   L A +P +V   TVN++C S ++AI  A+  I     D+ + GG+E M                GH  ++ G+ L       Y   S  MG  AE+    + I RE QD F V S  R  AA   G F  EIV VE
Sbjct:    3 NLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIVLLADLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHM----------------GHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGIGREEQDAFGVESHRRAWAATQEGRFKNEIVGVE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: VRAB_STAAS (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MSSA476) GN=vraB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.329e-14
Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = 2
Query:  134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            IV   RT  G + GTL  L   +L     +   ++     S + +V  GNV+    G   AR+A L AG+ +S+   T+++ C SGL+++  A + IQ G   V +AGG+ES S AP    + ++   +   +L +   +       +D SM   AE  A+ + ++RE QD+FA  S +        G  + EI+P+ V
Sbjct:    6 IVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYLEVISKIDDVVLGNVVGN--GGNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP---WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQLTAENVKNGNISQEILPITV 199          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.329e-14
Identity = 59/217 (27.19%), Postives = 93/217 (42.86%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGH--DSLVDGMLKD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + +V   RTP          + A  LG + +   L R ++DP L+ ++ FG V+        AR+  LG G+  S    +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +  K   L    + L    +KD       + +     SMG  AE  A+ H I+RE QD  A  S      A   G  + E+    V
Sbjct:   15 IAVVAGLRTPFAKQATAFHGVPAVDLGKLVVSEMLARTDLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVSTDAYSVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRQLRVKDLLPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.329e-14
Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G    ++ A  L +  + + L R   ++ + + ++++G V      G   AR AAL A +P+SV   TVN++C S ++A+  A++ I  G     + GG+E M + P             + +   GM             MG  AE+ A  H I+RE QD FA  S  R  AA  +GAF  EI+P
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQAGLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadI PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14
Identity = 65/213 (30.52%), Postives = 95/213 (44.60%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHD-SLVDGM-LKD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            V IV   RTP        S + A  LG + +   L R ++DP L+ +V FG V+        AR+  LG G+       +V + CA+  ++ +  ++SI  G  D+ +AGG +S S  P    K LA +     K   LG    ++ G+ LKD       + +     SMG  AE  A+ H ITR  QD  A  S      A   G  A E++
Sbjct:   14 VAIVAGLRTPFARQSTEFSQVPAVDLGKMVVSDLLARTDIDPKLIDQVVFGQVVQMPEAPNIAREIVLGTGMNIHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTLGQKLKVLSGLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTHGITRAEQDALAHRSHTLASQAWRDGKIAGEVM 226          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14
Identity = 63/201 (31.34%), Postives = 94/201 (46.77%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G    ++ A  L +  + + L R   ++ + + ++++G V      G   AR AAL A +P+SV   TVN++C S ++A+  A++ I  G     + GG+E M + P             + +   GM             MG   E+ A  H I+RE QD FA  S  R  AA  +GAF  EI+P
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTTEMLARMHGISREMQDAFAARSHARAWAATQSGAFKNEIIP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.385e-14
Identity = 59/217 (27.19%), Postives = 93/217 (42.86%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGH--DSLVDGMLKD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + +V   RTP          + A  LG + +   L R ++DP L+ ++ FG V+        AR+  LG G+  +    +V++ CA+  +A+   ++SI  G  D+ +AGG +S S  P        + L +  K   L    + L    LKD       + +     SMG  AE  A+ H I+RE QD  A  S      A   G  + E+    V
Sbjct:   15 IAVVAGLRTPFAKQATAFHGVPAVDLGKLVVSELLARTSLDPKLIDQLVFGQVVQMPEAPNIAREIVLGTGMSVTTDAYSVSRACATSFQAVANVTESIMAGTVDIAIAGGADSSSVLPIGVSKKLARALVDLNKARNLQQRFNILRALRLKDLMPVPPAVAEYSTGLSMGQTAEQMAKSHQISREAQDALAHRSHTLAAQAWADGKLSGEVFTAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14
Identity = 62/213 (29.11%), Postives = 92/213 (43.19%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA-----------RKGSRLGHDSLVD-GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            + +V   RTP        S+  A  LG +A++A + + ++DP L+ +V FG V+        AR+  LG G+       +V + CA+  +      +SI  G  D+ +AGG +S S  P    K LA             +K S L   SL D   +   + +     SMG  AE  A+ H ITRE QD  A  S      A   G    E++
Sbjct:   21 IAVVSGIRTPFAKQSTAFSTTPAVDLGKLAVKALMDKTDIDPKLIDQVVFGQVVQMPEAPNIAREIVLGTGMNIGTDAYSVTRACATSFQTTANVVESIMAGTIDIGIAGGADSSSVLPIGVSKKLASTLLALSKTKTVYQKLSLLRTLSLKDIAPVPPAVAEYSTGISMGQTAEQMAKSHGITREEQDALAHRSHTLAAKAWKDGLIQDEVM 233          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14
Identity = 63/201 (31.34%), Postives = 94/201 (46.77%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G    ++ A  L +  + + L R   ++ + + ++++G V      G   AR AAL A +P+SV   TVN++C S ++A+  A++ I  G     + GG+E M + P             + +   GM             MG  AE+ A  H I+RE QD FA  S  R  AA  + AF  EI+P
Sbjct:    4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGM-------------MGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14
Identity = 70/224 (31.25%), Postives = 105/224 (46.88%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTL-SSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD---GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            ++V +V   RTPMG   G +  ++ A  L +  +   ++R  N+DP+ ++++ +G V      G   AR A L   IP SV   TVN++C S ++A+  A+  I  G  DV + GG+E M + P              D  +D   G+ K          SMG  AEL   Q+ I+RE QD F   S ++  AA   G +  EIV  E     G    ++D DE
Sbjct:    2 KEVVVVDCIRTPMGRSKGGIFRNVRAETLSAHLMSKLIERNPNLDPNEIEDIIWGCVQQTKEQGFNIARNAQLLTDIPRSVAAVTVNRLCGSSMQALHDATSGIMSGRGDVYMIGGVEHMGHVPM-------------DFNIDFHPGIAKTA---ARASGSMGMTAELLGRQNGISREMQDAFGARSHQKAHAAAVEGRWN-EIVATEGHDADG-ILKLIDADE 207          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_ACIAD3.315e-1431.283-ketoacyl-CoA thiolase OS=Acinetobacter sp. (stra... [more]
VRAB_STAAS4.329e-1430.15Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
FADI_AERHH4.329e-1427.193-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
FADA_SHISS4.329e-1431.843-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADI_VIBVY5.654e-1430.523-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADA_ECOUT5.654e-1431.343-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_AERS47.385e-1427.193-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADI_VIBF19.645e-1429.113-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADA_SHIDS9.645e-1431.343-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADA_PSEA69.645e-1431.253-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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