CX043432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.665e-13 Identity = 59/213 (27.70%), Postives = 92/213 (43.19%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718 + IV RTP + A +G + + L+R N + S + ++ FG V+ AR+ LG G+P SV +V++ CA+ +AI ++SI G V +AGG +S S P L + K LG + L+ + + SMG AE A+ H+I+RE+QD A S A G E++ Sbjct: 15 IAIVSGLRTPFAKQATAFHHVPALDMGKLVVNEMLERLNFNKSEIDQLVFGQVVQMPEAPNIAREIVLGTGMPVSVDAYSVSRACATSFQAIANVAESIMAGSVTVGIAGGADSSSVLPIGVSKKLAGSLVDLNKARTLGQRLKIFSKLRLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDALAHRSHSLATQAWADGKLKDEVM 227
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEPW (3-ketoacyl-CoA thiolase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadI PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.165e-13 Identity = 59/219 (26.94%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP +SA +G + + + R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L GL D+ SMG AE A+ ++I+R +QD A S +AG A E++ V Sbjct: 15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELISRSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDISTDAYSVTRACATSFQSTVNVAESILTGNMEIGIAGGSDSSSVLPIGVSKKLAHALVDLNKARSFGQKLSIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMAAHV 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.165e-13 Identity = 61/219 (27.85%), Postives = 97/219 (44.29%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP +SA +G + + L R+ +DP ++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G D+ +AGG +S S P K LA A K LG + L GL D+ SMG AE A+ ++I+R +QD A S +AG A E++ V Sbjct: 15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNLDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSLGQRLSIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMVAHV 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 60/213 (28.17%), Postives = 89/213 (41.78%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-------SLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718 V IV RTP S + A LG + + L R ++DP L+++V FG V+ AR+ LG G+ +V + CA+ +A + ++SI G ++ +AGG +S S P L K LG S D M + + + SMG AE A+ H I+R QD A S A G E++ Sbjct: 14 VAIVAGLRTPFARQSTEFSQVPAVDLGKMVVSEMLARTDIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMNIHTDAYSVTRACATSFQAAVNVAESIMAGTIEIGIAGGADSSSVLPIGVSKKLAANLLALSKTKTLGQKLNILKSLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKTHGISRAEQDALAHRSHTLASQAWKEGKIQGEVM 226
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEHH (3-ketoacyl-CoA thiolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 59/219 (26.94%), Postives = 96/219 (43.84%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP +SA +G + + L R+ ++P ++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G D+ +AGG +S S P K LA A K G + L GL D+ SMG AE A+ ++I+R +QD A S +AG A E++ V Sbjct: 15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELNPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSTVNVAESIMTGNMDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLAIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMAAHV 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 56/220 (25.45%), Postives = 91/220 (41.36%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLG-----------HDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP + A LG + + L R+ + P+ ++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K LG HD L + + + MG AE A+ + ITRE QD A S +R A G E++ V Sbjct: 15 IAIVSGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIPPAAIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTLGQRLKLFSRLRLHDLL---PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLTNEVMTAYV 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadI PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 53/217 (24.42%), Postives = 91/217 (41.94%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP + A LG + + L R+ + P +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K +G + L+ + + MG AE A+ + ITRE QD A S +R A G E++ V + Sbjct: 15 IAIVSGLRTPFARQATAFHGIPAVDLGKMVVGEMLARSEISPDVIEQLVFGQVVQMPEAPNVAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMTGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMGLRLKLFSQLRLRDLAPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAALAWSEGKLGDEVMTVYI 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: ECHB_MOUSE (Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12 Identity = 65/236 (27.54%), Postives = 101/236 (42.80%), Query Frame = 2 Query: 89 APAAASDSIKP------RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 APA + S K +++ +V R P + L L A+ L R N+ +V + FG V+ AR+AALGAG + TV C S +A+ A I G DV+VAGG+E MS+ P K + + K LG + + + + + +MG A+ A +++R QD++A+ S AQD G + +IVP +V Sbjct: 36 APAVQTKSKKTLAKPNMKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLHRTNIPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLS-DIVPFKV 270
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.376e-12 Identity = 58/220 (26.36%), Postives = 98/220 (44.55%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVS 733 + IV RTP +SA +G + + + R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K LG + M + GL D+ SMG AE A+ + I+R +QD A S ++G E++ V+ Sbjct: 15 IAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELISRSELDPKLIEQLVYGQVVLMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNVEIGIAGGADSSSVLPITVSKKLAHALVDLNKARTLGQKFAI--MRRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGISRADQDALAHRSHTLATETWNSGNLRDEVMTAHVA 232
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.376e-12 Identity = 58/213 (27.23%), Postives = 93/213 (43.66%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-----------KYLAEARKGSR----LGHDSLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718 + +V RTP + + A +G + + L+ + DP L+++V FG V+ AR+ LG G+ +V + CA+ +A ++SI G D+ +AGG +S S P L++AR S+ L S+ D M + + + SMG AE A+ H ITR+ QD A S A G E++ Sbjct: 15 IAVVSGLRTPFARQATAFNGVPALDMGKMVVNEMLQELDFDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMHIGTDAYSVTRACATSFQAAANVAESIISGTIDIGIAGGADSSSVLPIGVSKKLAATLLALSKARTMSKRLKLLSTLSVKDLMPVPPAVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEVM 227 The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bpback to top |