CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.665e-13
Identity = 59/213 (27.70%), Postives = 92/213 (43.19%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            + IV   RTP          + A  +G + +   L+R N + S + ++ FG V+        AR+  LG G+P SV   +V++ CA+  +AI   ++SI  G   V +AGG +S S  P          L +  K   LG    +   L+          + +     SMG  AE  A+ H+I+RE+QD  A  S      A   G    E++
Sbjct:   15 IAIVSGLRTPFAKQATAFHHVPALDMGKLVVNEMLERLNFNKSEIDQLVFGQVVQMPEAPNIAREIVLGTGMPVSVDAYSVSRACATSFQAIANVAESIMAGSVTVGIAGGADSSSVLPIGVSKKLAGSLVDLNKARTLGQRLKIFSKLRLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDALAHRSHSLATQAWADGKLKDEVM 227          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEPW (3-ketoacyl-CoA thiolase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.165e-13
Identity = 59/219 (26.94%), Postives = 97/219 (44.29%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          +SA  +G + +   + R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  GL D+              SMG  AE  A+ ++I+R +QD  A  S        +AG  A E++   V
Sbjct:   15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELISRSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMDISTDAYSVTRACATSFQSTVNVAESILTGNMEIGIAGGSDSSSVLPIGVSKKLAHALVDLNKARSFGQKLSIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMAAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.165e-13
Identity = 61/219 (27.85%), Postives = 97/219 (44.29%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          +SA  +G + +   L R+ +DP  ++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  D+ +AGG +S S  P    K LA A     K   LG    +   L  GL D+              SMG  AE  A+ ++I+R +QD  A  S        +AG  A E++   V
Sbjct:   15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNLDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSLGQRLSIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMVAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 60/213 (28.17%), Postives = 89/213 (41.78%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHD-------SLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            V IV   RTP        S + A  LG + +   L R ++DP L+++V FG V+        AR+  LG G+       +V + CA+  +A +  ++SI  G  ++ +AGG +S S  P          L    K   LG         S  D M +   + +     SMG  AE  A+ H I+R  QD  A  S      A   G    E++
Sbjct:   14 VAIVAGLRTPFARQSTEFSQVPAVDLGKMVVSEMLARTDIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMNIHTDAYSVTRACATSFQAAVNVAESIMAGTIEIGIAGGADSSSVLPIGVSKKLAANLLALSKTKTLGQKLNILKSLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKTHGISRAEQDALAHRSHTLASQAWKEGKIQGEVM 226          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEHH (3-ketoacyl-CoA thiolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 59/219 (26.94%), Postives = 96/219 (43.84%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          +SA  +G + +   L R+ ++P  ++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  D+ +AGG +S S  P    K LA A     K    G    +   L  GL D+              SMG  AE  A+ ++I+R +QD  A  S        +AG  A E++   V
Sbjct:   15 IAIVSGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELNPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMDVSTDAYSVTRACATSFQSTVNVAESIMTGNMDIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLAIFRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWNAGKLAEEVMAAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 56/220 (25.45%), Postives = 91/220 (41.36%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLG-----------HDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          + A  LG + +   L R+ + P+ ++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   LG           HD L    +   + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++   V
Sbjct:   15 IAIVSGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIPPAAIEQLVFGQVVQMPEAPNIAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTLGQRLKLFSRLRLHDLL---PVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSEGKLTNEVMTAYV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 53/217 (24.42%), Postives = 91/217 (41.94%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          + A  LG + +   L R+ + P +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K   +G    +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G    E++ V +
Sbjct:   15 IAIVSGLRTPFARQATAFHGIPAVDLGKMVVGEMLARSEISPDVIEQLVFGQVVQMPEAPNVAREIVLGTGMSVHTDAYSVSRACATSFQAVANVAESLMTGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMGLRLKLFSQLRLRDLAPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAALAWSEGKLGDEVMTVYI 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: ECHB_MOUSE (Trifunctional enzyme subunit beta, mitochondrial OS=Mus musculus GN=Hadhb PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 65/236 (27.54%), Postives = 101/236 (42.80%), Query Frame = 2
Query:   89 APAAASDSIKP------RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            APA  + S K       +++ +V   R P      +   L    L   A+   L R N+   +V  + FG V+        AR+AALGAG  +     TV   C S  +A+  A   I  G  DV+VAGG+E MS+ P        K + +  K   LG    +    +          + +   + +MG  A+  A   +++R  QD++A+ S      AQD G  + +IVP +V
Sbjct:   36 APAVQTKSKKTLAKPNMKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLHRTNIPKDVVDYIIFGTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLNFLSPELPAVAEFSTNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLS-DIVPFKV 270          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadI PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.376e-12
Identity = 58/220 (26.36%), Postives = 98/220 (44.55%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVS 733
            + IV   RTP          +SA  +G + +   + R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K   LG    +  M + GL D+              SMG  AE  A+ + I+R +QD  A  S        ++G    E++   V+
Sbjct:   15 IAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELISRSELDPKLIEQLVYGQVVLMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNVEIGIAGGADSSSVLPITVSKKLAHALVDLNKARTLGQKFAI--MRRLGLKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGISRADQDALAHRSHTLATETWNSGNLRDEVMTAHVA 232          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.376e-12
Identity = 58/213 (27.23%), Postives = 93/213 (43.66%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-----------KYLAEARKGSR----LGHDSLVDGM-LKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            + +V   RTP        + + A  +G + +   L+  + DP L+++V FG V+        AR+  LG G+       +V + CA+  +A    ++SI  G  D+ +AGG +S S  P             L++AR  S+    L   S+ D M +   + +     SMG  AE  A+ H ITR+ QD  A  S      A   G    E++
Sbjct:   15 IAVVSGLRTPFARQATAFNGVPALDMGKMVVNEMLQELDFDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMHIGTDAYSVTRACATSFQAAANVAESIISGTIDIGIAGGADSSSVLPIGVSKKLAATLLALSKARTMSKRLKLLSTLSVKDLMPVPPAVAEYSTGISMGQTAEQMAKSHGITRQEQDALAYRSHTLAAKAWKDGLIRGEVM 227          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADI_PSEHT3.665e-1327.703-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]
FADI_SHEPW8.165e-1326.943-ketoacyl-CoA thiolase OS=Shewanella piezotoleran... [more]
FADI_SHEPA8.165e-1327.853-ketoacyl-CoA thiolase OS=Shewanella pealeana (st... [more]
FADI_VIBPA1.819e-1228.173-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADI_SHEHH1.819e-1226.943-ketoacyl-CoA thiolase OS=Shewanella halifaxensis... [more]
FADI_ESCF31.819e-1225.453-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADI_ENT381.819e-1224.423-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
ECHB_MOUSE1.819e-1227.54Trifunctional enzyme subunit beta, mitochondrial O... [more]
FADI_SHEDO2.376e-1226.363-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADI_PHOPR2.376e-1227.233-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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