CX043432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655 K + IV RTP +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655 K + IV RTP +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655 K + IV RTP +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2 Query: 116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655 K + IV RTP +SA +G + + L R+ +DP L++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L KD + + SMG AE A+ ++I+R +QD A Sbjct: 11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11 Identity = 58/219 (26.48%), Postives = 95/219 (43.38%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 + IV RTP +SA +G + + L R+ +DP ++++ +G V+ AR+ LG G+ S +V + CA+ ++ + ++SI G ++ +AGG +S S P K LA A K G + L GL D+ SMG AE A+ ++I+R +QD A S D+G E++ V Sbjct: 15 IAIVMGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSGHLRDEVMVAHV 231
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11 Identity = 52/213 (24.41%), Postives = 89/213 (41.78%), Query Frame = 2 Query: 128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718 + IV RTP + A +LG + + L R+ + +++++ FG V+ AR+ LG G+ +V++ CA+ +A+ ++S+ G +AGG +S S P + L + K G + L+ + + MG AE A+ + ITRE QD A S +R A G A E++ Sbjct: 15 IAIVSGLRTPFARQATAFHGIPAVELGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARILVDVNKARTTGQKLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLADEVM 227
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: VRAB_STAEQ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=vraB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11 Identity = 55/201 (27.36%), Postives = 90/201 (44.78%), Query Frame = 2 Query: 134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 I+ R G + G L L L + SL+ +V GN + G AR++ L AG+ + T+++ C SGL+A++ A + +Q G + +AGG+ES S AP + + + ++G D SM AE A+++ I+R QDDFA S + + G + EI+P +V Sbjct: 6 IIAAKRIAFGKYGGRLKHLEPESLLEPLFNHFTDQYPKVMSLLDDVILGNTVGN--GGNLARKSLLEAGLDFKIPGITIDRQCGSGLEAVIQACRMVQSGAGTIYIAGGVESTSRAPWKIKRPQSVYESEFPQFFERAPFAREG-----EDPSMIEAAENVAKKYHISRNEQDDFAYRSHQLASKNMNNGNISQEILPFKV 199
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: VRAB_STAES (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=vraB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 55/201 (27.36%), Postives = 90/201 (44.78%), Query Frame = 2 Query: 134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730 I+ R G + G L L L + SL+ +V GN + G AR++ L AG+ + T+++ C SGL+A++ A + +Q G + +AGG+ES S AP + + + ++G D SM AE A+++ I+R QDDFA S + + G + EI+P +V Sbjct: 6 IIAAKRIAFGKYGGRLRHLEPESLLEPLFNHFTDQYPKVMSLLDDVILGNTVGN--GGNLARKSLLEAGLDFKIPGITIDRQCGSGLEAVIQACRMVQSGAGTIYIAGGVESTSRAPWKIKRPQSVYESEFPQFFERAPFAREG-----EDPSMIEAAENVAKKYHISRNEQDDFAYRSHQLASKNMNNGNISQEILPFKV 199
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11 Identity = 65/229 (28.38%), Postives = 99/229 (43.23%), Query Frame = 2 Query: 125 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-KYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCS--------------MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI 760 ++ +V RTP L A L AI+A +++ + + + G V+ AR+AAL AG+P+ + TV C S A+ + G + I+AGG+E +S+ P +Y ARK + LG + D LK G V N S MG + A +++R QD+FA+ S A G F ++VPV + KP TI Sbjct: 25 NIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNARK-AMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFT-DVVPVFLDG--KKPKTI 249 The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bpback to top |