CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2
Query:  116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655
            K   + IV   RTP          +SA  +G + +   L R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  KD       + +     SMG  AE  A+ ++I+R +QD  A
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2
Query:  116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655
            K   + IV   RTP          +SA  +G + +   L R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  KD       + +     SMG  AE  A+ ++I+R +QD  A
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2
Query:  116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655
            K   + IV   RTP          +SA  +G + +   L R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  KD       + +     SMG  AE  A+ ++I+R +QD  A
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 2
Query:  116 KPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGML--KD------GLWDVYNDCSMGTCAELCAEQHSITRENQDDFA 655
            K   + IV   RTP          +SA  +G + +   L R+ +DP L++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  KD       + +     SMG  AE  A+ ++I+R +QD  A
Sbjct:   11 KGERIAIVAGLRTPFAKQATAFHGVSALDMGKMVVNELLARSELDPKLIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSAVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKLQIFRRLGIKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALA 206          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11
Identity = 58/219 (26.48%), Postives = 95/219 (43.38%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP----KYLAEA----RKGSRLGHDSLVDGMLKDGLWDVY----------NDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            + IV   RTP          +SA  +G + +   L R+ +DP  ++++ +G V+        AR+  LG G+  S    +V + CA+  ++ +  ++SI  G  ++ +AGG +S S  P    K LA A     K    G    +   L  GL D+              SMG  AE  A+ ++I+R +QD  A  S        D+G    E++   V
Sbjct:   15 IAIVMGLRTPFAKQATAFHGVSALDMGKMVVNELLSRSELDPKEIEQLVYGQVVQMPAAPNIAREIVLGTGMNVSTDAYSVTRACATSFQSTVNVAESIMTGNIEIGIAGGADSSSVLPIGVSKKLAHALVDLNKARSFGQKWAIIRRL--GLKDLLPVPPAVAEYSTGLSMGQTAEQMAKTYNISRADQDALAHRSHTLATETWDSGHLRDEVMVAHV 231          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11
Identity = 52/213 (24.41%), Postives = 89/213 (41.78%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP--------KYLAEARKGSRLGHDSLVDGMLK--------DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIV 718
            + IV   RTP          + A +LG + +   L R+ +   +++++ FG V+        AR+  LG G+       +V++ CA+  +A+   ++S+  G     +AGG +S S  P        + L +  K    G    +   L+          + +      MG  AE  A+ + ITRE QD  A  S +R   A   G  A E++
Sbjct:   15 IAIVSGLRTPFARQATAFHGIPAVELGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARILVDVNKARTTGQKLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWAEGKLADEVM 227          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: VRAB_STAEQ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=vraB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11
Identity = 55/201 (27.36%), Postives = 90/201 (44.78%), Query Frame = 2
Query:  134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            I+   R   G + G L  L    L          +     SL+ +V  GN +    G   AR++ L AG+   +   T+++ C SGL+A++ A + +Q G   + +AGG+ES S AP  +   +           +     ++G      D SM   AE  A+++ I+R  QDDFA  S +      + G  + EI+P +V
Sbjct:    6 IIAAKRIAFGKYGGRLKHLEPESLLEPLFNHFTDQYPKVMSLLDDVILGNTVGN--GGNLARKSLLEAGLDFKIPGITIDRQCGSGLEAVIQACRMVQSGAGTIYIAGGVESTSRAPWKIKRPQSVYESEFPQFFERAPFAREG-----EDPSMIEAAENVAKKYHISRNEQDDFAYRSHQLASKNMNNGNISQEILPFKV 199          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: VRAB_STAES (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=vraB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11
Identity = 55/201 (27.36%), Postives = 90/201 (44.78%), Query Frame = 2
Query:  134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            I+   R   G + G L  L    L          +     SL+ +V  GN +    G   AR++ L AG+   +   T+++ C SGL+A++ A + +Q G   + +AGG+ES S AP  +   +           +     ++G      D SM   AE  A+++ I+R  QDDFA  S +      + G  + EI+P +V
Sbjct:    6 IIAAKRIAFGKYGGRLRHLEPESLLEPLFNHFTDQYPKVMSLLDDVILGNTVGN--GGNLARKSLLEAGLDFKIPGITIDRQCGSGLEAVIQACRMVQSGAGTIYIAGGVESTSRAPWKIKRPQSVYESEFPQFFERAPFAREG-----EDPSMIEAAENVAKKYHISRNEQDDFAYRSHQLASKNMNNGNISQEILPFKV 199          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 65/229 (28.38%), Postives = 99/229 (43.23%), Query Frame = 2
Query:  125 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAP-KYLAEARKGSRLGHDSLVD--GMLKDGLWDVYNDCS--------------MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI 760
            ++ +V   RTP          L A  L   AI+A +++  +    +  +  G V+        AR+AAL AG+P+ +   TV   C S   A+      +  G  + I+AGG+E +S+ P +Y   ARK + LG +   D    LK G   V N  S              MG   +  A   +++R  QD+FA+ S      A   G F  ++VPV +     KP TI
Sbjct:   25 NIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNARK-AMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFT-DVVPVFLDG--KKPKTI 249          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADI_SHEB92.627e-1127.553-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB82.627e-1127.553-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB52.627e-1127.553-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB22.627e-1127.553-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHELP3.430e-1126.483-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADI_CITK83.430e-1124.413-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
VRAB_STAEQ4.480e-1127.36Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAES5.851e-1127.36Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
YKA3_CAEEL9.981e-1128.38Uncharacterized protein B0303.3 OS=Caenorhabditis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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