CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30
Identity = 80/217 (36.87%), Postives = 113/217 (52.07%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDK 769
            R V +V   RTP G + G L   +AT L   A +AAL    V P  V  V  GNVL ++      AR   L  GIP      T+N++C SG ++I+   Q I +   +V++ GG ESMS AP  +   R G++LG D  ++  L   L D +    +   AE  A +H I+RE  D +A+ S +R  AA DAG F  E+ P+EV   +GK +  VD+
Sbjct:    5 RGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRTVRFGTKLGSDIKLEDSLWVSLTDQHVQLPIAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVDE 221          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.600e-30
Identity = 79/217 (36.41%), Postives = 112/217 (51.61%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDK 769
            R V IV   RTP G + G L   + T +   A  AAL    V P  V  V  GNV+ ++      AR   L  GIP      T+N++C SG ++I+   Q I    ++V++ GG ESMS AP  +   R G++LG +  ++  L  GL D +    M   AE  A +H I+RE+ D +A+ S +R   A DAG F  E+ PVEV   +GK +  VD+
Sbjct:    5 RGVFIVAAKRTPFGAYGGLLKDFTPTDMAEFAARAALSAGRVSPETVDSVVVGNVMQSSSDAIYLARHVGLRVGIPKETPAITINRLCGSGFQSIVSGCQEICSRDSEVVLCGGTESMSQAPYCVRNIRFGTKLGSELKLEDTLWTGLTDTHVQMPMAITAENLAVKHQISREDCDRYALQSQQRWKTANDAGYFDNEMAPVEVKTRKGKQTMQVDE 221          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.254e-29
Identity = 79/217 (36.41%), Postives = 115/217 (53.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDK 769
            R V IV   RTP G + G L   SAT L   A  AAL    V P  +  V  GNV+ ++   A  AR   L  G+P      T+N++C SG ++I+   Q I     +V++ GG ESMS +P  +   R G++ G D  ++  L  GL D +    MG  AE  A +++I+RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD+
Sbjct:    5 RGVFIVAAKRTPFGAYGGLLKDFSATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYCVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAENLAAKYNISREDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVDE 221          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.793e-29
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDK 769
            R V IV   RTP G + G L   +AT L   A  AAL    V P  +  V  GNV+ ++   A  AR   L  G+P      T+N++C SG ++I+   Q I     +V++ GG ESMS +P  +   R G++ G D  ++  L  GL D +    MG  AE  A +++I+RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD+
Sbjct:    5 RGVFIVAAKRTPFGAYGGLLKDFTATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYSVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAENLAAKYNISREDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVDE 221          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.460e-27
Identity = 82/220 (37.27%), Postives = 125/220 (56.82%), Query Frame = 2
Query:  134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            IV   RTP G + G L+++ A  LG+I I A ++R  +V+ + V +V +G    A    +   R +AL AG+P  V  TTVN++C S L AI +A+++I+ G   +I+AGG+ESMS AP  + ++     +  ++   ++    +   L  +Y   +M   AE  AEQ  I RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  ++D DE
Sbjct:    6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEP-VVIDTDE 224          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 82/224 (36.61%), Postives = 126/224 (56.25%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALK-RANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG----SRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            RDV I    RTP+G F G L+ + A  L ++ ++A ++    V    V EVFFG    A    +  AR A L AG+P S+   T+N++CASG+ AI  A ++I  G  ++ +AGG+ESMS AP  + +A  G     +L   ++    +   +   Y   SM   A+  A+ + ++R +QD FA+ S ++  AAQ AG FA EIVPV ++  +G+  TIV++DE
Sbjct:    2 RDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIEPNPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMSRAPFVMGKAESGYSRNMKLEDTTIGWRFINPLMKSQYGVDSMPETADNVADDYQVSRADQDAFALRSQQKAAAAQAAGFFAEEIVPVRIAHKKGE--TIVERDE 223          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 81/224 (36.16%), Postives = 128/224 (57.14%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA----RKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            R+V I    RTP+G F G+LS++ A  L ++ ++A ++R   VD S + EVF G    A    +  AR A L AG+P SV   T+N++CASG+ AI  A ++I  G  ++ +AGG+ESMS AP  + +A     +G ++   ++    +   + + Y    M   A+  A+ + ++R +QD FA+ S +R   AQ+AG FA EIVPV +   +G   T+V+ DE
Sbjct:    3 REVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGEDNRNVARMALLLAGLPESVPGVTLNRLCASGMDAIGTAFRAIACGEMELAIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFVNPLMKEQYGIDPMPQTADNVADDYRVSRADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKG--DTLVEHDE 224          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 80/215 (37.21%), Postives = 121/215 (56.28%), Query Frame = 2
Query:  134 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI 760
            IV   RTP G + G L+++ A  LG+I I A ++R  +V+ + V +V +G    A    +   R +AL AG+P  V  TTVN++C S L AI +A+++I+ G   +I+AGG+ESMS AP  + ++     +  ++   ++    +   L  +Y   +M   AE  AEQ  I RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  I
Sbjct:    6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEPVVI 220          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 78/224 (34.82%), Postives = 129/224 (57.59%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA----RKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            R+V I    RTP+G F G+L+++ A  L ++ ++A ++R   VD S + EV+ G    A    +  AR A L AG+P+SV   T+N++CASG+ A+  A ++I  G  ++++AGG+ESMS AP  + +A     +G ++   ++    +   +   Y   +M   A+  A+ + ++R +QD FA+ S +    AQ AG FA EIVPV +   +G+  T+VD DE
Sbjct:    3 REVYICDAVRTPIGRFGGSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFINPLMKAQYGVDAMPETADNVADDYKVSRADQDAFALRSQQLAGRAQAAGYFAEEIVPVVIKGKKGE--TVVDADE 224          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.615e-24
Identity = 84/238 (35.29%), Postives = 121/238 (50.84%), Query Frame = 2
Query:   83 QMAPAAASDSIK--PRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDE 775
            Q+ P A    ++  P DV IV   RT +G GF G+  S+ +  + +  ++  +K+ N+DPSL+++V  GNVL+   G    R A L AGIP +     VN+ C+SGL AI   +  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG   E  A Q +I+RE QD+FA  S+ +   A  AGAF  EI+P+  S  R    T    IVD DE
Sbjct:   10 QLKPNAKQSILQKNPDDVVIVAAYRTAIGKGFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVAAGAFKSEILPIR-SIIRNSDGTEKEIIVDTDE 237          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
THIM_PONAB4.309e-3036.873-ketoacyl-CoA thiolase, mitochondrial OS=Pongo ab... [more]
THIM_BOVIN9.600e-3036.413-ketoacyl-CoA thiolase, mitochondrial OS=Bos taur... [more]
THIM_MOUSE1.254e-2936.413-ketoacyl-CoA thiolase, mitochondrial OS=Mus musc... [more]
THIM_RAT2.793e-2935.943-ketoacyl-CoA thiolase, mitochondrial OS=Rattus n... [more]
PCAF_ACIAD4.460e-2737.27Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
PCAF_PSEPU2.213e-2636.61Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida... [more]
PCAF_PSEAE2.891e-2636.16Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aerugi... [more]
CATF_ACIAD3.775e-2637.21Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
PCAF_PSESB2.447e-2534.82Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (s... [more]
THIKA_CANTR4.615e-2435.293-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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