CX043432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 74/222 (33.33%), Postives = 114/222 (51.35%), Query Frame = 2 Query: 122 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 ++V IV RTPMG G A L + ++ LKR +VDP+ ++++++G V G AR +AL AG+P S+ TTVN++C S ++A+ AS++I +G ++ + GG+E M + P G H L + K G+ MG AE+ + H I+RE QD FA+ S ++ A G F EI+P+E G T+V DE Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRYTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----MNHGVDF-HSGLSKSVAKASGM--------MGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPIEGHDENG-VLTLVTHDE 208
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 74/222 (33.33%), Postives = 114/222 (51.35%), Query Frame = 2 Query: 122 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 ++V IV RTPMG G A L + ++ LKR +VDP+ ++++++G V G AR +AL AG+P S+ TTVN++C S ++A+ AS++I +G ++ + GG+E M + P G H L + K G+ MG AE+ + H I+RE QD FA+ S ++ A G F EI+P+E G T+V DE Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLKRNPSVDPNDIEDIYWGCVQQTLEQGFNIARNSALLAGLPQSIAATTVNRLCGSSMQALHDASRAIMVGDAEICIIGGVEHMGHVP-----MNHGVDF-HSGLSKSVAKASGM--------MGLTAEMLGKMHGISREQQDAFALASHQKAHKATIEGYFDSEILPMEGHDENG-ALTLVTHDE 208
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P + + GM MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P + + GM MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 69/205 (33.66%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P + + GM MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANNVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 72/212 (33.96%), Postives = 105/212 (49.53%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + A + + I L+R VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H ITRE QD F V S + A G F EI+P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNTKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19 Identity = 69/225 (30.67%), Postives = 109/225 (48.44%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 S+ PRDV ++ R+PMG G ++ A L + I+A R + VDP+ V+++ +G V + G ARQ +L IP++ TVN++C S + AI A+Q+I G DV V GG+E M + P + + + M MG AE+ A+ H I+R+ QD+F S A G F EI+ ++ G P+ +++ DE Sbjct: 2 SLNPRDVVVIDCVRSPMGRAKAGCFRNVRAETLSATLIDALFDRNDKVDPAEVEDLIWGCVNQTLEQGFNVARQISLLTRIPHTSSAQTVNRLCGSAMSAIHTAAQAIMTGNGDVFVVGGVEHMGHVPMTQGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGISRQQQDEFGARSHRLAHEATLEGRFRNEIISIQGHDDDGFPA-LIENDE 212
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19 Identity = 74/225 (32.89%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 S++PRDV IV ARTPMG G ++ A L + I L R A +DP+ + ++ +G V+ G AR L AG+P++V TVN++C S + A+ A+ +I G+ DV + GG+E M + LGH SMG AE + H ITRE D+F S + A + G FA EI+ G P T++ DE Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGHIDMN-QHVDPNPALGHSV------------AQAAGSMGLTAEYLSLLHGITREAMDEFGARSHRKAAEATEQGKFAREIIARIGHDETGAP-TLIKHDE 212
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEAE (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa GN=fadA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19 Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEAB (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=fadA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19 Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197 The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bpback to top |