CX043432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19 Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + + S + + L N VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+IQ G DV V GG+E M GH ++ G+ + L+ MG AE+ + H I+RE QD F S + A G F EI+P+E Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19 Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + + K G+ MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19 Identity = 70/205 (34.15%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++A L R +DPSL+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P + GM MG AE+ + H I+RE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALLIRNPQLDPSLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAVRSHQRAHAATVEGRFAKEIWAME 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19 Identity = 69/205 (33.66%), Postives = 98/205 (47.80%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+L+++V +G V G AR A+L AGIP + TVN++C S + AI A+++I G+ D + GG+E M + P + GM MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANKVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19 Identity = 68/205 (33.17%), Postives = 100/205 (48.78%), Query Frame = 2 Query: 122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++A L R VDP+ +++V +G V G AR A+L AG+P + TVN++C S ++A+ AS++I G+ D + GG+E M + P + + GM MG AE+ + H I+RE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLAANVAKASGM-------------MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.301e-18 Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + + K G+ MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.301e-18 Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + + K G+ MG AE+ + H ITRE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.218e-18 Identity = 72/212 (33.96%), Postives = 104/212 (49.06%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + A + + I L+R + VDP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F V S + A G F EI+P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18 Identity = 70/206 (33.98%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++ L R +DP+ +++V +G V G AR A+L AGIP + TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + + K G+ MG AE+ + H I+RE QD FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKEIYAIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18 Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + A + + I L+R VDP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L MG AE+ + H ITRE QD F + S + A G F EI+P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197 The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bpback to top |