CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEA7 (3-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa (strain PA7) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19
Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRAN--VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +   +  +  S  + + L   N  VDP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+IQ G  DV V GG+E M                GH  ++ G+  +    L+       MG  AE+  + H I+RE QD F   S +    A   G F  EI+P+E
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKLLERNPKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIQTGNGDVFVIGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDKFGARSHQLAWKATQEGKFKDEIIPME 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19
Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++  L R   +DP+ +++V +G V      G   AR A+L AGIP +    TVN++C S ++AI  A+++I  G+ D  + GG+E M + P        G    H  L + + K  G+        MG  AE+  + H ITRE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATIEGRFAKEIYGIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19
Identity = 70/205 (34.15%), Postives = 99/205 (48.29%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++A L R   +DPSL+++V +G V      G   AR A+L AGIP +    TVN++C S + AI  A+++I  G+ D  + GG+E M + P               +   GM             MG  AE+  + H I+RE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALLIRNPQLDPSLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAVRSHQRAHAATVEGRFAKEIWAME 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.625e-19
Identity = 69/205 (33.66%), Postives = 98/205 (47.80%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++  L R   +DP+L+++V +G V      G   AR A+L AGIP +    TVN++C S + AI  A+++I  G+ D  + GG+E M + P               +   GM             MG  AE+  + H ITRE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNLIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDAIHQAARAIMTGMGDTFIIGGVEHMGHVPMSHGVDFHPGLANKVAKASGM-------------MGLTAEMLGKLHGITREQQDAFAVRSHQRAYAATVEGRFAKEIYGIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 68/205 (33.17%), Postives = 100/205 (48.78%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG   G    ++ A  L +  ++A L R   VDP+ +++V +G V      G   AR A+L AG+P +    TVN++C S ++A+  AS++I  G+ D  + GG+E M + P             + +   GM             MG  AE+  + H I+RE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKGGVFRNVRAETLSAELMKALLLRNPGVDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGVPKTAGAVTVNRLCGSSMEALHQASRAIMTGMGDTFIIGGVEHMGHVPMNHGVDFHPGLAANVAKASGM-------------MGLTAEMLGKLHGISREMQDQFAVRSHQRAHAASIEGRFANEIYAIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.301e-18
Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++  L R   +DP+ +++V +G V      G   AR A+L AGIP +    TVN++C S ++AI  A+++I  G+ D  + GG+E M + P        G    H  L + + K  G+        MG  AE+  + H ITRE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.301e-18
Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++  L R   +DP+ +++V +G V      G   AR A+L AGIP +    TVN++C S ++AI  A+++I  G+ D  + GG+E M + P        G    H  L + + K  G+        MG  AE+  + H ITRE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGITREQQDAFAVRSHQRAHAATVEGRFAKEIYGIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.218e-18
Identity = 72/212 (33.96%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R + VDP  V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I  G  DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F V S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNDKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVIGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGVRSHQLAHKATVEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 70/206 (33.98%), Postives = 103/206 (50.00%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++  L R   +DP+ +++V +G V      G   AR A+L AGIP +    TVN++C S ++AI  A+++I  G+ D  + GG+E M + P        G    H  L + + K  G+        MG  AE+  + H I+RE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKGLLLRNPQLDPNAIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVEHMGHVP-----MNHGVDF-HPGLANNVAKASGM--------MGLTAEMLGKLHGISREQQDAFAVRSHQRAHAATVEGRFAKEIYAIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEPK (3-ketoacyl-CoA thiolase OS=Pseudomonas putida (strain KT2440) GN=fadA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV IV   RTPMG   G +  +  A  + +  I   L+R   VDP  V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A+Q+I  G  DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F + S +    A   G F  EI+P++
Sbjct:    2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQTLEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHLSLHAAKASGMMGLTAEMLGKMHGITREQQDLFGLRSHQLAHKATVEGKFKDEIIPMQ 197          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_PSEA75.838e-1933.023-ketoacyl-CoA thiolase OS=Pseudomonas aeruginosa ... [more]
FADA_SHEON7.625e-1934.473-ketoacyl-CoA thiolase OS=Shewanella oneidensis G... [more]
FADA_SHEDO7.625e-1934.153-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADA_SHEB57.625e-1933.663-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADA_SHEAM9.958e-1933.173-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADA_SHESM1.301e-1834.473-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHESA1.301e-1834.473-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_PSEPU2.218e-1833.963-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=f... [more]
FADA_SHESR2.897e-1833.983-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_PSEPK2.897e-1833.493-ketoacyl-CoA thiolase OS=Pseudomonas putida (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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