CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32
Identity = 84/202 (41.58%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLK-LFDYDETIRPETTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32
Identity = 88/202 (43.56%), Postives = 116/202 (57.43%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R+ QD+FA  S  R  AA   G FA EIV +E     G      D DE +      + L +LRP F    GTVTAG +S++SDGAAA++++S ++   LGL   AKI   A A     +    P  A  KA+  AGL    +D +E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 RQQQDEFAARSHRRAHAATVEGRFAKEIVGLEGHDASGA-RFFYDYDEVIRPETTVETLSQLRPVFDPVNGTVTAGTSSALSDGAAAMLVMSADRAKALGLTPRAKIRAMAVAGCDAAIMGYGPVPATQKALKRAGLTIGDIDLFELNEAFAAQSLPCVKDLGLQDVVDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEE 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadA PE=3 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31
Identity = 84/197 (42.64%), Postives = 119/197 (60.41%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            RE QD FA+ S ++   A   G F  EI+P+E     G   T+V  DE +      + L  LRP+F    GTVTAG++S++SDGA+A++++S EK  +LGL + AK+   A +   P +    P  A  KA+  AGL    ++ +E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSG+RI  TL+
Sbjct:  162 REQQDAFALASHQKAHKATIEGYFDSEILPMEGHDENGA-LTLVTHDEVIRPETTLEGLAALRPAFDPANGTVTAGSSSALSDGASAMLVMSEEKANELGLPIRAKVRSMAVSGCDPSIMGYGPVPATKKALKRAGLSLDDIELFELNEAFAAQSLPCIKDLGLLDVMDEKVNLNGGAIALGHPLGCSGSRIATTLI 357          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEU2 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=fadA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31
Identity = 83/202 (41.09%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F + S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLK-VFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSIADIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31
Identity = 89/200 (44.50%), Postives = 115/200 (57.50%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G     VD DE +      + L  LRP F    GTVTAG +S++SDGAAA++++  EK   LGL + A++   A A     +    P  A  KA++ AGL    +D  E+NEAFA  +L   K LGL     DKVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REMQDQFAVRSHQRAHAASIEGRFANEIYAIEGHDANGALIK-VDYDEVIRPETTLESLAGLRPVFDPANGTVTAGTSSALSDGAAAMLVMEEEKARALGLTIRARVRSMAVAGCDAAIMGYGPVPATQKALARAGLSIQDMDVIELNEAFAAQSLPCVKDLGLMDVVEDKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.625e-31
Identity = 86/202 (42.57%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S +R  AA  AG F  EI+P       G      D DE +     A+ L +L+P+F    GTVTAG +S++SDGAAA++++S  +  +LGL   A+I   A     P +    P  A   A+  AGL AS +D +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++ +
Sbjct:  162 REMQDAFAARSHQRAWAATQAGHFKQEIIPTSGHDADGVLKRY-DFDEVIRPETTAEGLSQLKPAFDPANGTVTAGTSSALSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASDIDLFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R++QD+FAV S +R  AA  A  FA EIV        G      D DE +  + + A L  LRP+F    GTVTAG +S++SDGA+A++++S  +   LGL   A+I   A     P +    P  A   A+  AGL+   +  +E+NEAFA  +LA  K LGL     DKVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 RQSQDEFAVRSHQRAYAATQADHFAKEIVATNGHDADGILKRF-DFDEVIRPETNLAGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     DK+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 83/199 (41.71%), Postives = 114/199 (57.29%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            R+ QD+FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++  EK   LGL + A+I   A A     +    P  A  KA+  AGL  + +D  E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 RQQQDEFAVRSHQRAHAATVEGRFANEIHAIEGHDANGALIKVMHDEVIRPETSLESLATLRPVFDPANGTVTAGTSSALSDGASAMLVMEEEKAKALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     DK+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLM 360          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_PSEF59.024e-3241.583-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_AERHH9.024e-3243.563-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
FADA_VIBF11.179e-3142.643-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADA_PSEU21.179e-3141.093-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_SHEAM1.539e-3144.503-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADA_ENTS82.625e-3142.573-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]
FADA_YERE83.429e-3143.073-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADA_SHEPC3.429e-3141.213-ketoacyl-CoA thiolase OS=Shewanella putrefaciens... [more]
FADA_SHELP3.429e-3141.713-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADA_SHEB83.429e-3141.213-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
back to top