CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEU5 (3-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (strain A1501) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 83/202 (41.09%), Postives = 114/202 (56.44%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F S + A G F EI+P+E G + D DE + + L +L+P+F GGTVTAG +S I+DGA+ ++++S ++ LGLQ +A + A A P + P + KA+ AGL + E+NEAFA A L + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 166 REAQDQFGYRSHQLAWKATQEGKFKDEIIPMEGHDENGFLK-VFDYDETIRPETTLEGLAELKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLQPMAVVRAMALAGVDPAIMGYGPVPSTQKALKRAGLTMDDISHVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD+FA S +R AA G F EI+ +E A G + D + + L KLRP F GTVTAG +S++SDGA+A++++S K +LGL + A+I A A P + P A KA++ AG+ + E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSG+RI +L+ ++ Sbjct: 162 REQQDEFAYRSHQRAQAATVEGRFRREILAMEGHAADGSLILVEDDEVIRPETTVEGLSKLRPVFNPASGTVTAGTSSALSDGASAMLVMSEAKAKELGLPIRARIKAMAVAGCDPSIMGYGPVPASKKALAQAGITIDDLGVVELNEAFAAQSLPVMKDLGLMDVVDEKVNLNGGAIALGHPLGCSGSRISTSLIHLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSE14 (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 83/202 (41.09%), Postives = 116/202 (57.43%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F + S + A G F EI+P++ G + D DE + + L L+P+F GGTVTAG +S I+DGA+ ++++S ++ LG+Q +A I A A P + P A KA+ AGL + +D E+NEAFA A L + K+L +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 166 REQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLK-VFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLTIADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 85/201 (42.29%), Postives = 113/201 (56.22%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G + + L LRP+F GTVTAG +S++SDGAAA++++S + +LGLQ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ + Sbjct: 162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFSYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLQPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLAASDIDLFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 89/205 (43.41%), Postives = 111/205 (54.15%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F V S R AA G F EIV VE G ++ D L F + LRP F GGTVTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q Sbjct: 166 REEQDAFGVESHRRAWAATQEGRFKNEIVGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALRPVFDPKGGTVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSVADIQTVELNEAFAAQGLSVLKGLGLYEKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadA PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 86/212 (40.57%), Postives = 116/212 (54.72%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |