CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31 Identity = 92/203 (45.32%), Postives = 119/203 (58.62%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGG--TVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 R +QD FA+ S +R AQ+AG FA EIVPV + +G T+V+ DE + L +L+P NG TVTAGNAS ++DGAAALVL S E V K GL A++ G A A AP + P A+ K + L D E+NEAFA LA + LG+ D KVN +GGA+ALGHPLG SGAR+++T L L + Sbjct: 179 RADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKG--DTLVEHDEHPRPDTTLEALARLKPV---NGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGLTPRARVLGMASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACLRELGVADDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEK 376
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31 Identity = 82/201 (40.80%), Postives = 115/201 (57.21%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP+F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AGL + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REQQDAFAVRSHQRAHAATIEGRFAKEIWGIEGHDANGALIKVMTDEVIRPETTLESLAGLRPAFDPVNGTVTAGTSSALSDGASAMLVMEESKARALGLTIRARIRSMAVAGCDAAIMGYGPVPATKKALARAGLSVADLDLIELNEAFAAQSLPCVKDLGLQDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEE 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31 Identity = 87/209 (41.63%), Postives = 117/209 (55.98%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK----------LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FA S +R A +GAF EI+P +AG D D L +FD + L L+P+F GTVTAG++S++SDGAAA++++S + LGL V A+I A P + P A A+ AGL S + +E+NEAFA L K LGL +KVN++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REMQDQFAARSHQRAHHATQSGAFRHEIIP---TAGH-------DADGALQRFDYDEVIRPDTTVDSLAALKPAFDPVNGTVTAGSSSALSDGAAAMLIMSESRAASLGLPVRARIRAMAVVGCDPSIMGYGPVPATKLALKRAGLSLSDIGLFELNEAFAAQTLPCIKDLGLLEQIDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.639e-31 Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVEDKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.639e-31 Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI--VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S +R AA AG FA EIV V G + D DE + + L LRP+F GTVTAG++S++SDGAAA++++SG + + GL+ A+I A P + P A A+ AGL + + +E+NEAFA L K LGL +KVN++GGA+ALGHPLGCSGARI TLL ++ + Sbjct: 162 REMQDRFAARSHQRAAAATQAGHFAAEIVAV---CGHDADGVLKRYDADEVIRPETTVESLMALRPAFDPVDGTVTAGSSSALSDGAAAMLIMSGSQARQQGLKARARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLSIADIGVFELNEAFAAQTLPCIKDLGLMDKLDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31 Identity = 73/197 (37.06%), Postives = 114/197 (57.87%), Query Frame = -1 Query: 253 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 843 R D++AV S +R + A G F EI+P+ V V++DEG+ + + L+P F+++G T+ N+S +SDGA+A++L+ + +LGL V+A+ + P P +AI K + GLE Q+ +EINEAFA L + L + D+VN +GG++ALGHP+G SGARI+ TLL V++ Sbjct: 164 RSEADEYAVTSQKRALEATKKGHFLAEIIPMRVG------DETVERDEGIRETSLGTIESLKPVFRQDG-VCTSANSSQLSDGASAVLLMKRRRADELGLPVVAEFIDFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAFASQVLCCLRKLQIGEDRVNRYGGSIALGHPIGASGARIVCTLLSVMK 353
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31 Identity = 86/197 (43.65%), Postives = 114/197 (57.87%), Query Frame = -1 Query: 265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLL 843 R+ QD+FA S +R AA AG F EI+P G T D DE + + A L LRP+F GTVTAG +S++SDGA+A++L+S + LGL+ A+I A P + P A A+ AGL +D +E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSG+RI TLL Sbjct: 162 RQMQDEFAARSHQRAHAATLAGYFKNEIIPTTGHDADGV-LTRYDFDEVIRPETTVASLAALRPAFDPVNGTVTAGTSSALSDGASAMLLMSESRAKALGLKARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQSLPCIKDLGLLDSIDDKINLNGGAIALGHPLGCSGSRISTTLL 357
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31 Identity = 83/200 (41.50%), Postives = 108/200 (54.00%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD+F S R AA AG F EI+ +E G+ + L KLRP F GTVTA +S++SDGA+A++++S +K LGL+ A+I A A + P A KA+ AGL + E+NEAFA L+ K L L D +NV+GGA+ALGHPLGCSGARI VTLL + Q Sbjct: 166 REQQDEFGYESHRRAWAATQAGRFDNEIIGIEGHDAEGRLQLCTVDEVIRPDTSMESLAKLRPVFDPANGTVTAATSSALSDGASAMLVMSAQKAKDLGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAGLTVEDMQTIELNEAFAAQGLSVLKALNLLDKRDIINVNGGAIALGHPLGCSGARITVTLLNAMEQ 365
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31 Identity = 84/202 (41.58%), Postives = 117/202 (57.92%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV--SAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F + S R AA G F EI+ +E AGR + T+ + + +++KLRP+F GGTVTA +S++SDGA+A++++S +K +LGL+ A+I A A + P A KA+ AG+ + E+NEAFA L+ K L L D VN++GGA+ALGHPLGCSGARI VTLL + Q Sbjct: 166 REEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDEAGRLQLCTVDEVIRPDATME--QMQKLRPAFDPVGGTVTAATSSALSDGASAMLIMSAQKAKELGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAGMSIDDMQTIELNEAFAAQGLSVLKALNLTDKQDIVNINGGAIALGHPLGCSGARITVTLLNAMEQ 365
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30 Identity = 82/201 (40.80%), Postives = 114/201 (56.72%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AGL + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ + Sbjct: 162 REQQDAFAVRSHQRAHAATVEGRFAKEIWAMEGHDANGALIKVMHDEVIRPETTMESLAGLRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGLTVADLDVIELNEAFAAQSLPCVKDLGLQDVVEEKINLNGGAIALGHPLGCSGARISTTLINLMEE 362 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |