CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PCAF_PSEAE (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa GN=pcaF PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31
Identity = 92/203 (45.32%), Postives = 119/203 (58.62%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGG--TVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R +QD FA+ S +R   AQ+AG FA EIVPV +   +G   T+V+ DE        + L +L+P    NG   TVTAGNAS ++DGAAALVL S E V K GL   A++ G A A  AP +    P  A+ K +    L     D  E+NEAFA   LA  + LG+  D  KVN +GGA+ALGHPLG SGAR+++T L  L +
Sbjct:  179 RADQDAFALRSQQRAGRAQEAGFFAEEIVPVTIRGRKG--DTLVEHDEHPRPDTTLEALARLKPV---NGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGLTPRARVLGMASAGVAPRIMGIGPVPAVRKLLRRLDLAIDAFDVIELNEAFASQGLACLRELGVADDSEKVNPNGGAIALGHPLGMSGARLVLTALHQLEK 376          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31
Identity = 82/201 (40.80%), Postives = 115/201 (57.21%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP+F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AGL  + +D  E+NEAFA  +L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++ +
Sbjct:  162 REQQDAFAVRSHQRAHAATIEGRFAKEIWGIEGHDANGALIKVMTDEVIRPETTLESLAGLRPAFDPVNGTVTAGTSSALSDGASAMLVMEESKARALGLTIRARIRSMAVAGCDAAIMGYGPVPATKKALARAGLSVADLDLIELNEAFAAQSLPCVKDLGLQDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEE 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.849e-31
Identity = 87/209 (41.63%), Postives = 117/209 (55.98%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK----------LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S +R   A  +GAF  EI+P   +AG        D D  L +FD  +          L  L+P+F    GTVTAG++S++SDGAAA++++S  +   LGL V A+I   A     P +    P  A   A+  AGL  S +  +E+NEAFA   L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REMQDQFAARSHQRAHHATQSGAFRHEIIP---TAGH-------DADGALQRFDYDEVIRPDTTVDSLAALKPAFDPVNGTVTAGSSSALSDGAAAMLIMSESRAASLGLPVRARIRAMAVVGCDPSIMGYGPVPATKLALKRAGLSLSDIGLFELNEAFAAQTLPCIKDLGLLEQIDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.639e-31
Identity = 82/199 (41.21%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     DK+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVEDKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.639e-31
Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTI--VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S +R  AA  AG FA EIV V    G      +   D DE +      + L  LRP+F    GTVTAG++S++SDGAAA++++SG +  + GL+  A+I   A     P +    P  A   A+  AGL  + +  +E+NEAFA   L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 REMQDRFAARSHQRAAAATQAGHFAAEIVAV---CGHDADGVLKRYDADEVIRPETTVESLMALRPAFDPVDGTVTAGSSSALSDGAAAMLIMSGSQARQQGLKARARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLSIADIGVFELNEAFAAQTLPCIKDLGLMDKLDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 73/197 (37.06%), Postives = 114/197 (57.87%), Query Frame = -1
Query:  253 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 843
            R   D++AV S +R + A   G F  EI+P+ V          V++DEG+ +     +  L+P F+++G   T+ N+S +SDGA+A++L+   +  +LGL V+A+   +      P      P +AI K +   GLE  Q+  +EINEAFA   L   + L +  D+VN +GG++ALGHP+G SGARI+ TLL V++
Sbjct:  164 RSEADEYAVTSQKRALEATKKGHFLAEIIPMRVG------DETVERDEGIRETSLGTIESLKPVFRQDG-VCTSANSSQLSDGASAVLLMKRRRADELGLPVVAEFIDFIAVGLKPRDMGLGPVVAIEKLLKRNGLEKDQISYFEINEAFASQVLCCLRKLQIGEDRVNRYGGSIALGHPIGASGARIVCTLLSVMK 353          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 86/197 (43.65%), Postives = 114/197 (57.87%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            R+ QD+FA  S +R  AA  AG F  EI+P       G   T  D DE +  +   A L  LRP+F    GTVTAG +S++SDGA+A++L+S  +   LGL+  A+I   A     P +    P  A   A+  AGL    +D +E+NEAFA  +L   K LGL     DK+N++GGA+ALGHPLGCSG+RI  TLL
Sbjct:  162 RQMQDEFAARSHQRAHAATLAGYFKNEIIPTTGHDADGV-LTRYDFDEVIRPETTVASLAALRPAFDPVNGTVTAGTSSALSDGASAMLLMSESRAKALGLKARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQSLPCIKDLGLLDSIDDKINLNGGAIALGHPLGCSGSRISTTLL 357          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYWF (3-ketoacyl-CoA thiolase OS=Psychrobacter sp. (strain PRwf-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 83/200 (41.50%), Postives = 108/200 (54.00%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD+F   S  R  AA  AG F  EI+ +E     G+       +          L KLRP F    GTVTA  +S++SDGA+A++++S +K   LGL+  A+I   A A     +    P  A  KA+  AGL    +   E+NEAFA   L+  K L L    D +NV+GGA+ALGHPLGCSGARI VTLL  + Q
Sbjct:  166 REQQDEFGYESHRRAWAATQAGRFDNEIIGIEGHDAEGRLQLCTVDEVIRPDTSMESLAKLRPVFDPANGTVTAATSSALSDGASAMLVMSAQKAKDLGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAGLTVEDMQTIELNEAFAAQGLSVLKALNLLDKRDIINVNGGAIALGHPLGCSGARITVTLLNAMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYCK (3-ketoacyl-CoA thiolase OS=Psychrobacter cryohalolentis (strain K5) GN=fadA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.977e-31
Identity = 84/202 (41.58%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV--SAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F + S  R  AA   G F  EI+ +E    AGR +  T+ +        +  +++KLRP+F   GGTVTA  +S++SDGA+A++++S +K  +LGL+  A+I   A A     +    P  A  KA+  AG+    +   E+NEAFA   L+  K L L    D VN++GGA+ALGHPLGCSGARI VTLL  + Q
Sbjct:  166 REEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDEAGRLQLCTVDEVIRPDATME--QMQKLRPAFDPVGGTVTAATSSALSDGASAMLIMSAQKAKELGLKPRARIRSMAIAGCDAAIMGYGPVPATQKALKRAGMSIDDMQTIELNEAFAAQGLSVLKALNLTDKQDIVNINGGAIALGHPLGCSGARITVTLLNAMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30
Identity = 82/201 (40.80%), Postives = 114/201 (56.72%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AGL  + +D  E+NEAFA  +L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++ +
Sbjct:  162 REQQDAFAVRSHQRAHAATVEGRFAKEIWAMEGHDANGALIKVMHDEVIRPETTMESLAGLRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGLTVADLDVIELNEAFAAQSLPCVKDLGLQDVVEEKINLNGGAIALGHPLGCSGARISTTLINLMEE 362          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
PCAF_PSEAE5.849e-3145.32Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aerugi... [more]
FADA_SHEFN5.849e-3140.803-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]
FADA_PECCP5.849e-3141.633-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]
FADA_SHESA7.639e-3141.213-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_ERWT97.639e-3142.653-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
THIK_ENCCU9.977e-3137.063-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
FADA_SERP59.977e-3143.653-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
FADA_PSYWF9.977e-3141.503-ketoacyl-CoA thiolase OS=Psychrobacter sp. (stra... [more]
FADA_PSYCK9.977e-3141.583-ketoacyl-CoA thiolase OS=Psychrobacter cryohalol... [more]
FADA_SHEDO1.303e-3040.803-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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