CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30 Identity = 86/209 (41.15%), Postives = 117/209 (55.98%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK----------LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FA S +R A +GAF EIVP +AG D D L +FD + L L+P+F GTVTAG++S++SDGA+A++++S + LGL V A+I A P + P A A+ AGL + + +E+NEAFA L K LGL +KVN++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REMQDQFAARSHQRAYHATQSGAFRHEIVP---TAGH-------DADGALQRFDYDEVIRPDTTIDSLAALKPAFDPVNGTVTAGSSSALSDGASAMLIMSESRAASLGLPVRARIRAMAVVGCDPSIMGYGPVPATKLALKRAGLSLADIGIFELNEAFAAQTLPCIKDLGLLEQLDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30 Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K L L + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALSLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30 Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAHAATVEGRFAKEIYAIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30 Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30 Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FAV S +R AA G FA EI +E G ++ + + L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ Sbjct: 162 REQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30 Identity = 82/202 (40.59%), Postives = 114/202 (56.44%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F S A G F EI+P++ G + D DE + + L L+P+F GGTVTAG +S I+DGA+ ++++S ++ LG+Q +A + A A P + P + KA+ AGL + +D E+NEAFA A L + KLL +KVN+HGGA+ALGHP GCSGARI TLL V++Q Sbjct: 166 REAQDAFGERSHRLAHKATVEGKFKDEIIPMQGYDENGFLK-VFDYDETIRPETTLESLATLKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVVRAMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30 Identity = 82/197 (41.62%), Postives = 116/197 (58.88%), Query Frame = -1 Query: 265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLL 843 R+ QD+FA S +R AA G F EI+P+E G + D DE + + L LRP+F GTVTAG++S++SDGA+A++++S + +LGL + A++ A A P + P A KA+ AGL + E+NEAFA +L K LGL +KVN++GGA+ALGHPLGCSG+RI TL+ Sbjct: 162 RQMQDEFAARSHQRAHAATIEGRFKNEILPIEGHDENGILK-LYDYDEVIRPETTVEGLSNLRPAFDPVNGTVTAGSSSALSDGASAMLVMSEHRAKELGLTIRARVKSMAVAGCDPSIMGYGPVPATQKALKRAGLSIDDIGMVELNEAFAAQSLPCAKDLGLLDKIDEKVNLNGGAIALGHPLGCSGSRISTTLI 357
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30 Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F V S R AA G F EI+ VE G ++ D L F + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q Sbjct: 166 REEQDTFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30 Identity = 80/200 (40.00%), Postives = 111/200 (55.50%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD F + S R AA G F EI+ +E G+ + +++KLRP+F GTVTA +S++SDGA+A++++S +K +LGL+ A+I A A + P A KA+ AG+ + E+NEAFA L+ K L L D VN++GGA+ALGHPLGCSGARI VTLL + Q Sbjct: 166 REEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDAAGRLQLCTVDEVIRPDATMEQMQKLRPAFDPVSGTVTAATSSALSDGASAMLIMSAQKAKELGLKPRARIRSMAVAGCDAAIMGYGPVPATQKALKRAGMSIEDMQTIELNEAFAAQGLSVLKALNLTDKQDIVNINGGAIALGHPLGCSGARITVTLLNAMEQ 365
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30 Identity = 85/200 (42.50%), Postives = 116/200 (58.00%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVAL---ANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD F V S + A G + EIVP+E G + + DE + + ++KLRP F GTVTAG +S++SDGA+A++++S E+ LGL+ AKI A A + P A KA++ AGL +D E+NEAFA +L + KLL +KVN++GGA+ALGHPLGCSGARI TLL V+ Sbjct: 166 REQQDAFGVRSHKLAWEATQQGRWDNEIVPIEGHDQNGH-KVLCEIDEVIRPGASIEDMQKLRPVFDPANGTVTAGTSSALSDGASAMLVMSAERAQALGLKPRAKIRSMAVAGCDAAIMGYGPVPATQKALARAGLTIDDIDYVELNEAFAAQSLPVAKDLKLLDKMEEKVNLNGGAIALGHPLGCSGARITGTLLNVM 364 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |