CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.303e-30
Identity = 86/209 (41.15%), Postives = 117/209 (55.98%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK----------LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S +R   A  +GAF  EIVP   +AG        D D  L +FD  +          L  L+P+F    GTVTAG++S++SDGA+A++++S  +   LGL V A+I   A     P +    P  A   A+  AGL  + +  +E+NEAFA   L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REMQDQFAARSHQRAYHATQSGAFRHEIVP---TAGH-------DADGALQRFDYDEVIRPDTTIDSLAALKPAFDPVNGTVTAGSSSALSDGASAMLIMSESRAASLGLPVRARIRAMAVVGCDPSIMGYGPVPATKLALKRAGLSLADIGIFELNEAFAAQTLPCIKDLGLLEQLDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30
Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   L L + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     DK+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALSLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.702e-30
Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAHAATVEGRFAKEIYAIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30
Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30
Identity = 81/199 (40.70%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FAV S +R  AA   G FA EI  +E     G    ++  +    +     L  LRP F    GTVTAG +S++SDGA+A++++   K   LGL + A+I   A A     +    P  A  KA++ AG+  + +D  E+NEAFA  +L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDAFAVRSHQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.223e-30
Identity = 82/202 (40.59%), Postives = 114/202 (56.44%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F   S      A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A +   A A   P +    P  +  KA+  AGL  + +D  E+NEAFA  A   L + KLL    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REAQDAFGERSHRLAHKATVEGKFKDEIIPMQGYDENGFLK-VFDYDETIRPETTLESLATLKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPMAVVRAMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFVELNEAFAAQALPVLKDLKLLDKMEEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30
Identity = 82/197 (41.62%), Postives = 116/197 (58.88%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            R+ QD+FA  S +R  AA   G F  EI+P+E     G    + D DE +      + L  LRP+F    GTVTAG++S++SDGA+A++++S  +  +LGL + A++   A A   P +    P  A  KA+  AGL    +   E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSG+RI  TL+
Sbjct:  162 RQMQDEFAARSHQRAHAATIEGRFKNEILPIEGHDENGILK-LYDYDEVIRPETTVEGLSNLRPAFDPVNGTVTAGSSSALSDGASAMLVMSEHRAKELGLTIRARVKSMAVAGCDPSIMGYGPVPATQKALKRAGLSIDDIGMVELNEAFAAQSLPCAKDLGLLDKIDEKVNLNGGAIALGHPLGCSGSRISTTLI 357          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.903e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDTFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSYA2 (3-ketoacyl-CoA thiolase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 80/200 (40.00%), Postives = 111/200 (55.50%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F + S  R  AA   G F  EI+ +E     G+       +         +++KLRP+F    GTVTA  +S++SDGA+A++++S +K  +LGL+  A+I   A A     +    P  A  KA+  AG+    +   E+NEAFA   L+  K L L    D VN++GGA+ALGHPLGCSGARI VTLL  + Q
Sbjct:  166 REEQDAFGLESHRRAWAATTEGRFDNEIIGIEGHDAAGRLQLCTVDEVIRPDATMEQMQKLRPAFDPVSGTVTAATSSALSDGASAMLIMSAQKAKELGLKPRARIRSMAVAGCDAAIMGYGPVPATQKALKRAGMSIEDMQTIELNEAFAAQGLSVLKALNLTDKQDIVNINGGAIALGHPLGCSGARITVTLLNAMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 85/200 (42.50%), Postives = 116/200 (58.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVAL---ANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD F V S +    A   G +  EIVP+E     G    + + DE +      + ++KLRP F    GTVTAG +S++SDGA+A++++S E+   LGL+  AKI   A A     +    P  A  KA++ AGL    +D  E+NEAFA  +L    + KLL    +KVN++GGA+ALGHPLGCSGARI  TLL V+
Sbjct:  166 REQQDAFGVRSHKLAWEATQQGRWDNEIVPIEGHDQNGH-KVLCEIDEVIRPGASIEDMQKLRPVFDPANGTVTAGTSSALSDGASAMLVMSAERAQALGLKPRAKIRSMAVAGCDAAIMGYGPVPATQKALARAGLTIDDIDYVELNEAFAAQSLPVAKDLKLLDKMEEKVNLNGGAIALGHPLGCSGARITGTLLNVM 364          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_ERWCT1.303e-3041.153-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADA_SHESW1.702e-3040.703-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHESR1.702e-3040.703-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHESM2.223e-3040.703-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADA_SHEON2.223e-3040.703-ketoacyl-CoA thiolase OS=Shewanella oneidensis G... [more]
FADA_PSEMY2.223e-3040.593-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (... [more]
FADA_PHOPR2.903e-3041.623-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADA_ACIBT2.903e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_PSYA23.791e-3040.003-ketoacyl-CoA thiolase OS=Psychrobacter arcticus ... [more]
FADA_ALCBS3.791e-3042.503-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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