CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 86/205 (41.95%), Postives = 111/205 (54.15%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-----STIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S  R  AA   G F  EI+ VE     G         ++  D  L  F     + L+P F   GG+VTA  +S++SDGA+A++L+S E+   LGL+  A I   A A     +    P  A  KA+  AGL  + +   E+NEAFA   L+  K LGL    D VN++GGA+ALGHPLGCSGARI  TLL V+ Q
Sbjct:  166 REEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAF-----KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.467e-30
Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  +GAF  EI+P       G   +    +    +     L  L+P+F    GTVTAG +S++SDGAAA++L+S  +  +LGL+  A++   A     P +    P  A   A+  AGL  S +D +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+  + +
Sbjct:  162 REMQDQFAARSHARAWAATQSGAFKAEIIPTGGHDADGVLKSFNYDEVIRPETTVETLSTLKPAFDPVTGTVTAGTSSALSDGAAAMLLMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSTSDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINQMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.467e-30
Identity = 82/201 (40.80%), Postives = 113/201 (56.22%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  +GAF  EI+P       G        +    +     L  LRP+F    GTVTAG++S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL AS +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTMEALATLRPAFDPVSGTVTAGSSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ENT38 (3-ketoacyl-CoA thiolase OS=Enterobacter sp. (strain 638) GN=fadA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.467e-30
Identity = 83/201 (41.29%), Postives = 113/201 (56.22%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  +GAF  EI+P       G        +    +     L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL   A+I   A     P +    P  A   A+  AGL AS++D +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TL+ ++ +
Sbjct:  162 REMQDQFAARSHARAWAATQSGAFKNEILPTGGHDVDGVLKQYYYDEVIRPETTVEALSALRPAFDPVTGTVTAGTSSALSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASEIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.446e-30
Identity = 85/210 (40.48%), Postives = 114/210 (54.29%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL AS +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.446e-30
Identity = 85/212 (40.09%), Postives = 115/212 (54.25%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL AS +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCNPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_ACIBY3.791e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBS3.791e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIBC3.791e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB53.791e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_ACIB33.791e-3041.953-ketoacyl-CoA thiolase OS=Acinetobacter baumannii... [more]
FADA_KLEP76.467e-3040.303-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADA_ESCF36.467e-3040.803-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADA_ENT386.467e-3041.293-ketoacyl-CoA thiolase OS=Enterobacter sp. (strai... [more]
FADA_SHISS8.446e-3040.483-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADA_SHIBS8.446e-3040.093-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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