CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29
Identity = 84/210 (40.00%), Postives = 113/210 (53.81%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL  S +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29
Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL  S +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPAIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.474e-29
Identity = 85/210 (40.48%), Postives = 112/210 (53.33%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S  R  AA  +GAF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +   LGL+  A +   A     P +    P  A   A+  AGL AS +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++
Sbjct:  162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 79/190 (41.58%), Postives = 107/190 (56.32%), Query Frame = -1
Query:  280 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARI 843
            RE+QD FA+ S +R   AQ +G  A EIVPV +   +G  + I   +    +    +LR L+  F+ NG  +TAGNAS ++DGAAAL++ S +     GL   A+I   A A   P +    P  A  + +  AGL    +D  E+NEAFA  AL   + LGL  D   VN +GGA+ALGHPLG SGAR+
Sbjct:  178 REDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANG-VITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARL 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 79/190 (41.58%), Postives = 107/190 (56.32%), Query Frame = -1
Query:  280 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARI 843
            RE+QD FA+ S +R   AQ +G  A EIVPV +   +G  + I   +    +    +LR L+  F+ NG  +TAGNAS ++DGAAAL++ S +     GL   A+I   A A   P +    P  A  + +  AGL    +D  E+NEAFA  AL   + LGL  D   VN +GGA+ALGHPLG SGAR+
Sbjct:  178 REDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANG-VITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARL 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29
Identity = 81/199 (40.70%), Postives = 115/199 (57.79%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP--DKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD F   S ++   A  AG +  EIV  +     G   T+V+ DE +     A+ L  LRP F    GTVTAG +S++SDGA+A++++S  K  +LGL    KI G A A   P      P  A  KA+  AGL  + ++ +E NEAFA  AL+  + L +    D++N++GGA+ALGHPLGCSG+RI  TL+ ++
Sbjct:  162 REMQDAFGARSHQKAHEAHLAGRWDNEIVATQGHDATGA-LTLVEHDEVIRPETTAESLSALRPVFDPVNGTVTAGTSSALSDGASAMLVMSAAKAKELGLTPRVKIRGMAVAGCDPATMGFGPVPATKKALKRAGLSIADIELFEFNEAFAAQALSCVRSLKVEDKMDQINLNGGAIALGHPLGCSGSRISGTLINLM 359          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.080e-28
Identity = 83/210 (39.52%), Postives = 112/210 (53.33%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD FA  S  R  AA  + AF  EI+P       G           +P T V+            L  LRP+F    GTVTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL  S +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++
Sbjct:  162 REMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28
Identity = 83/212 (39.15%), Postives = 113/212 (53.30%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FA  S  R  AA  + AF  EI+P       G           +P T V+            L  LRP+F    G VTAG +S++SDGAAA++++S  +  +LGL+  A++   A     P +    P  A   A+  AGL AS +  +E+NEAFA   L   K LGL     +K+N++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 REMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.692e-27
Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG---LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD F   S ++  AA   G +  EIV  E     G    ++D DE +      + +  LRP F    GTVTAG +S++SDGA+A++++S +K   LGL   AKI   A A     +    P  A  KA+  AG+  + ++  E NEAFA  AL+  K LG      DKVN++GGA+ALGHPLGCSG+RI  TL+ ++
Sbjct:  162 REMQDAFGARSHQKAHAAAVEGRWN-EIVATEGHDADGILK-LIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTSSALSDGASAMLIMSADKAKALGLTPRAKIRAMAVAGCDAAIMGFGPVPATQKALKRAGMTMADIELAEFNEAFAAQALSCIKQLGWLDTYEDKVNLNGGAIALGHPLGCSGSRISTTLINLM 359          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: YHFS_BACSU (Putative acetyl-CoA C-acetyltransferase yhfS OS=Bacillus subtilis GN=yhfS PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26
Identity = 72/194 (37.11%), Postives = 106/194 (54.64%), Query Frame = -1
Query:  268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP--AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843
            R  QD++A+LS +R   A D G +  E+V +            ++ DE   K  P  A + + +P F  + GTVTA N+S I+DGAAAL+++  EK   LGL+ + +  G A +   P     AP +AI + +    +    +D +EINEAFAV      + LG+   K+NV GGA+ALGHP G SGA ++  L
Sbjct:  148 RSMQDEYALLSHQRSRNAHDEGFYREEVVALGE----------LETDEAFLKTRPIEAIIPRAKPVFDTSSGTVTAANSSGIADGAAALLVMEEEKAAALGLKPVLRFIGSAVSGIHPNFPPAAPVVAIRQLLHTHDVTPDDIDLFEINEAFAVKICVCSQELGIPFSKINVRGGALALGHPYGASGAALVTRL 331          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_ECO574.192e-2940.003-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADA_ECO244.192e-2939.623-ketoacyl-CoA thiolase OS=Escherichia coli O139:H... [more]
FADA_ECOL55.474e-2940.483-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
PAAJ_ECOLX7.150e-2941.58Beta-ketoadipyl-CoA thiolase OS=Escherichia coli G... [more]
PAAJ_ECOLI7.150e-2941.58Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (... [more]
FADA_COLP37.150e-2940.703-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
FADA_SHIDS2.080e-2839.523-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADA_ECOLI2.717e-2839.153-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADA_PSEA66.692e-2740.503-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
YHFS_BACSU5.665e-2637.11Putative acetyl-CoA C-acetyltransferase yhfS OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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