CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29 Identity = 84/210 (40.00%), Postives = 113/210 (53.81%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A++ A P + P A A+ AGL S + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ Sbjct: 162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29 Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A++ A P + P A A+ AGL S + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ + Sbjct: 162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPAIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.474e-29 Identity = 85/210 (40.48%), Postives = 112/210 (53.33%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FA S R AA +GAF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + LGL+ A + A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ Sbjct: 162 REMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29 Identity = 79/190 (41.58%), Postives = 107/190 (56.32%), Query Frame = -1 Query: 280 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARI 843 RE+QD FA+ S +R AQ +G A EIVPV + +G + I + + +LR L+ F+ NG +TAGNAS ++DGAAAL++ S + GL A+I A A P + P A + + AGL +D E+NEAFA AL + LGL D VN +GGA+ALGHPLG SGAR+ Sbjct: 178 REDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANG-VITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARL 366
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29 Identity = 79/190 (41.58%), Postives = 107/190 (56.32%), Query Frame = -1 Query: 280 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARI 843 RE+QD FA+ S +R AQ +G A EIVPV + +G + I + + +LR L+ F+ NG +TAGNAS ++DGAAAL++ S + GL A+I A A P + P A + + AGL +D E+NEAFA AL + LGL D VN +GGA+ALGHPLG SGAR+ Sbjct: 178 REDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANG-VITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARL 366
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.150e-29 Identity = 81/199 (40.70%), Postives = 115/199 (57.79%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP--DKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD F S ++ A AG + EIV + G T+V+ DE + A+ L LRP F GTVTAG +S++SDGA+A++++S K +LGL KI G A A P P A KA+ AGL + ++ +E NEAFA AL+ + L + D++N++GGA+ALGHPLGCSG+RI TL+ ++ Sbjct: 162 REMQDAFGARSHQKAHEAHLAGRWDNEIVATQGHDATGA-LTLVEHDEVIRPETTAESLSALRPVFDPVNGTVTAGTSSALSDGASAMLVMSAAKAKELGLTPRVKIRGMAVAGCDPATMGFGPVPATKKALKRAGLSIADIELFEFNEAFAAQALSCVRSLKVEDKMDQINLNGGAIALGHPLGCSGSRISGTLINLM 359
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.080e-28 Identity = 83/210 (39.52%), Postives = 112/210 (53.33%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD FA S R AA + AF EI+P G +P T V+ L LRP+F GTVTAG +S++SDGAAA++++S + +LGL+ A++ A P + P A A+ AGL S + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ Sbjct: 162 REMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM 360
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_ECOLI (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12) GN=fadA PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.717e-28 Identity = 83/212 (39.15%), Postives = 113/212 (53.30%), Query Frame = -1 Query: 250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG-----------KPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843 RE QD FA S R AA + AF EI+P G +P T V+ L LRP+F G VTAG +S++SDGAAA++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ + Sbjct: 162 REMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA-----------LATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMER 362
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.692e-27 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = -1 Query: 256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG---LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843 RE QD F S ++ AA G + EIV E G ++D DE + + + LRP F GTVTAG +S++SDGA+A++++S +K LGL AKI A A + P A KA+ AG+ + ++ E NEAFA AL+ K LG DKVN++GGA+ALGHPLGCSG+RI TL+ ++ Sbjct: 162 REMQDAFGARSHQKAHAAAVEGRWN-EIVATEGHDADGILK-LIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTSSALSDGASAMLIMSADKAKALGLTPRAKIRAMAVAGCDAAIMGFGPVPATQKALKRAGMTMADIELAEFNEAFAAQALSCIKQLGWLDTYEDKVNLNGGAIALGHPLGCSGSRISTTLINLM 359
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: YHFS_BACSU (Putative acetyl-CoA C-acetyltransferase yhfS OS=Bacillus subtilis GN=yhfS PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.665e-26 Identity = 72/194 (37.11%), Postives = 106/194 (54.64%), Query Frame = -1 Query: 268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP--AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843 R QD++A+LS +R A D G + E+V + ++ DE K P A + + +P F + GTVTA N+S I+DGAAAL+++ EK LGL+ + + G A + P AP +AI + + + +D +EINEAFAV + LG+ K+NV GGA+ALGHP G SGA ++ L Sbjct: 148 RSMQDEYALLSHQRSRNAHDEGFYREEVVALGE----------LETDEAFLKTRPIEAIIPRAKPVFDTSSGTVTAANSSGIADGAAALLVMEEEKAAALGLKPVLRFIGSAVSGIHPNFPPAAPVVAIRQLLHTHDVTPDDIDLFEINEAFAVKICVCSQELGIPFSKINVRGGALALGHPYGASGAALVTRL 331 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |