CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21 Identity = 72/239 (30.13%), Postives = 112/239 (46.86%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOLU (3-ketoacyl-CoA thiolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + + + + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+VVE Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVVE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadI PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + + + + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+VVE Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLAEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAIVVE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 71/239 (29.71%), Postives = 112/239 (46.86%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S++ +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGATAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSELTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 71/239 (29.71%), Postives = 114/239 (47.70%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVFGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPC (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi C (strain RKS4594) GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 71/239 (29.71%), Postives = 114/239 (47.70%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALHS (3-ketoacyl-CoA thiolase OS=Salmonella heidelberg (strain SL476) GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 71/239 (29.71%), Postives = 114/239 (47.70%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFACEVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 73/239 (30.54%), Postives = 114/239 (47.70%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + P T + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYKN-PFTEDNNIRGTSTL--ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOSM (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + + + + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+VVE Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLAEDNNIRGNSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVVE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOLC (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadI PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPFVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |