CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALSV (3-ketoacyl-CoA thiolase OS=Salmonella schwarzengrund (strain CVM19633) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPK (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain AKU_12601) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALNS (3-ketoacyl-CoA thiolase OS=Salmonella newport (strain SL254) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALAR (3-ketoacyl-CoA thiolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ + S +D + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAYRSHQRAAQAWAEGKLAEEVMTTYAPPYKNPFS----EDNNIRGNSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFARDVLGRAQATGEVDDTKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadI PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20 Identity = 71/239 (29.71%), Postives = 114/239 (47.70%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ V + + + + G A KLRP+F G+VTA N++ ++DGAAA++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRTYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGCAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |