CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALSV (3-ketoacyl-CoA thiolase OS=Salmonella schwarzengrund (strain CVM19633) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPK (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A (strain AKU_12601) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALNS (3-ketoacyl-CoA thiolase OS=Salmonella newport (strain SL254) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 113/239 (47.28%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGTSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLHPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALAR (3-ketoacyl-CoA thiolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++       +   S    +D  + G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAYRSHQRAAQAWAEGKLAEEVMTTYAPPYKNPFS----EDNNIRGNSTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFARDVLGRAQATGEVDDTKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL    +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOL5 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL    +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL    +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO45 (3-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL    +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 71/239 (29.71%), Postives = 114/239 (47.70%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA++L++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRTYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGCAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_SALSV1.597e-2029.713-ketoacyl-CoA thiolase OS=Salmonella schwarzengru... [more]
FADI_SALPK1.597e-2029.713-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADI_SALPA1.597e-2029.713-ketoacyl-CoA thiolase OS=Salmonella paratyphi A ... [more]
FADI_SALNS1.597e-2029.713-ketoacyl-CoA thiolase OS=Salmonella newport (str... [more]
FADI_SALAR1.597e-2030.003-ketoacyl-CoA thiolase OS=Salmonella arizonae (st... [more]
FADI_ECOUT1.597e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECOL51.597e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli O6:K15... [more]
FADI_ECOK11.597e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 ... [more]
FADI_ECO451.597e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli O45:K1... [more]
FADI_SALTY2.085e-2029.713-ketoacyl-CoA thiolase OS=Salmonella typhimurium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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