CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALPB (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 70/239 (29.29%), Postives = 114/239 (47.70%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA+++++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALEP (3-ketoacyl-CoA thiolase OS=Salmonella enteritidis PT4 (strain P125109) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 70/239 (29.29%), Postives = 114/239 (47.70%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA+++++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALDC (3-ketoacyl-CoA thiolase OS=Salmonella dublin (strain CT_02021853) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 70/239 (29.29%), Postives = 114/239 (47.70%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA+++++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SALA4 (3-ketoacyl-CoA thiolase OS=Salmonella agona (strain SL483) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 70/239 (29.29%), Postives = 114/239 (47.70%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++   V   +   +   + +   G    A   KLRP+F    G+VTA N++ ++DGAAA+++++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +  ++++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLAEEVMTTYVPPYK---NPFAEDNNIRGASTLADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVIMMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFAREVLGRAQATGEVDDAKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO81 (3-ketoacyl-CoA thiolase OS=Escherichia coli O81 (strain ED1a) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL    +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMGDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLYELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHIDS (3-ketoacyl-CoA thiolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20
Identity = 70/239 (29.29%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   +   G    E++   +   +     + + +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GARI+   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQSWSEGKLKEEVMTAFIPPYK---QLLAEDNNICGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRTKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFACNVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARIITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO55 (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain 55989 / EAEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  S +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  L +                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELHRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO5E (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fadI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 70/239 (29.29%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     + + +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ECO57 (3-ketoacyl-CoA thiolase OS=Escherichia coli O157:H7 GN=fadI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 70/239 (29.29%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     + + +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QLLAEDNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.067e-20
Identity = 67/217 (30.88%), Postives = 107/217 (49.31%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+QD  A  S      A   G    E++   +   +    + +++D  + K    +   KL+P F    GTVTA NA+ ++DGAAA++++S  K   LG +++  +  +A +A   E      PA A P A+  AG+  + +D  E++EAFA   LAN K+                   +N DK NV GG++A GHP   +GAR++   L  L++
Sbjct:  199 REDQDALAHRSHSLATQAWADGKLKDEVMTAHLPPYK----SFIEEDNNIRKNSTVEGYAKLKPVFDRQHGTVTAANATPLTDGAAAVLMMSESKAKALGYEILGYVRSFAFSAIGVEKDMLMGPAHATPIALDRAGITLADLDLIEMHEAFASQTLANMKMFASDKFAQEHLGRSKAIGEINMDKFNVLGGSLAYGHPFAATGARLITQSLYELKR 411          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_SALPB2.085e-2029.293-ketoacyl-CoA thiolase OS=Salmonella paratyphi B ... [more]
FADI_SALEP2.085e-2029.293-ketoacyl-CoA thiolase OS=Salmonella enteritidis ... [more]
FADI_SALDC2.085e-2029.293-ketoacyl-CoA thiolase OS=Salmonella dublin (stra... [more]
FADI_SALA42.085e-2029.293-ketoacyl-CoA thiolase OS=Salmonella agona (strai... [more]
FADI_ECO812.085e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli O81 (s... [more]
FADI_SHIDS2.723e-2029.293-ketoacyl-CoA thiolase OS=Shigella dysenteriae se... [more]
FADI_ECO552.723e-2029.713-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]
FADI_ECO5E3.557e-2029.293-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADI_ECO573.557e-2029.293-ketoacyl-CoA thiolase OS=Escherichia coli O157:H... [more]
FADI_PSEHT6.067e-2030.883-ketoacyl-CoA thiolase OS=Pseudoalteromonas halop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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